Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121530g00003 ATGAATATATATGTACATAGGATACTTTCCTCAAACAATTTTACGGGAGAGCTACCTGCAACACTTGCCAACCTCACTAACTTAGAGGATATTCGACTTGGGGACAATCAATTCTCTGGAAAGATTCCTGATTTTATAGAAAGCTGGACAAATCTCAAAACATTAAATATTATAGGGAGTGGACTCAGCGGACCAATTCCTTCTGCTATTTCAAAATTGAGAAACTTAACTGACTTGATTCTAAGAAGTTGCAACATTCATGGAACACTACAGGACTATCTCTCAACAATGGAAATATCACAAATCTTAGACCTCAGCTTTAACAAATTGACTGGACCAATTCCACCTTCCTATAAGAATCTGAAACAAGTGAATCACATATTCTTAACTGGAAATCTTCTCAATGGATCATTGCCTTCAATATGGAAGAGTGATGCTACTAGCTTAGACGTTTCATATAATAACTTCAACCAAGATAATCAGCAATGCCAATATGGAAAAGTGAACTTGTTTGCAGCTAACTCTCCCACAATTAACAATTCAGGAATTGTTTCATGTTTGAGAAGCTCTGTCTCTGGTTGTTCTAAAGTCAACTCTATCCATATAAACTGTGGAGGAACATCGTTAAAAGTGAAGGGAATCACATATGATGAAGATTTTCATGAAGGGACAGCATTGTTTGACAGAGGTCAAAACAGAAACTGGGCAATTAGCACCACCGGTGACTACATGGATGTAGAAGCAGAGCATTCTACTGCCTCATTAAATGACACTTCTGACCTCTCTTTCAATGATGATCATCGCCAACTATACACCAATGCACGAATTTCTCCTATTTCTCTAACTTACTATGGGTTTTGCCTTCATGATGGAAACTACAAAGTCAACCTTCATTTTGCTGAGATCATGTTCACCAATGATCAAACTTATAGAAGCCTTGGAAGGCGTCTATTTGACATCTATATTCAGGGAGTTGTGGTGGAGAAGGATTTTAATATTGCAAAAGAAGCAGGAGGTGTTGGTAAGGCAATCATAAAATCTTACAGTGCAGCTGTGACTAATAATACCATTGAGATTCGATTATATTGGGCTGGAAAAGGGACAACTACAATCCCAGAGAAATCAGTGTACGGTCCTCTTATATCAGCCATATCTGTGGAGAACGAAAATGGAGATAGCCTATCAACAGGGGCTGTGATTGGAATTGTGGCCGCAGTGGTAATTATCATCATCATCTTAATACTTGGTGTGCTTTGGTGGAAGGGCTACCTAGGAAAGAAAAAATCTTCTTCCAGAGAATTTATGAGTTTAGATATACAGACAAGCTTATTTTCCTTACGACAAATCAAAGCAGCAACAAATAACTTTGATATCACCAACAAAATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGAGAGTTACCTAATGGTACAATAATAGCAGTGAAGCAGCTTTCTTCAAAATCAAGGCAAGGAAATCGCGAGTTCTTAAATGAAATAGGCATGATTTCTGCTTTACAACATCCTTGTCTTGTTAAACTCTATGGATGTTGTGTTGAGGGAGATCAACTATTGTTGGTATACGAATACATGCAAAACAATAGCCTTGCTCGTGCTTTATTTGGTCCAAAGGAACACCAAATAAAATTGGATTGGCCAACAAGGCAAAAGATTTGTATTGGTATTGCTAGAGGCTTAGCATACCTCCATGAAGAATCAAGATTGAAGATAGTTCATAGAGACATTAAAGCCACAAATGTCTTGCTTGACAGAGATCTTAATCCAAAGATATCAGATTTTGGTTTAGCGAAACTTGATGAAGAGGAAAATACCCACATTAGCACCCGAATAGCAGGAACATACGGATATATGGCTCCGGAATATGCAATGCATGGCTATTTAACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCGTTGGAAATCATTAGTGGGAGTACTAATACAACTCAGCGGGCAAAAGAAAAAGTAATTTATCTGCTTGATCTGGCACGTTTATTGAAAGAGAAAGGCAATCTAATGGAGCTAGTTGATAGAAGATTGGGCTCAAACTTTGATGAAGAGGAAGCCATGATAATGATTAAGGTAGCTCTACTATGCACTAATGTGTCTCCAACACTTAGACCAAACATGTCTTCCGTGGTAAGCATGTTAGAAGGCAAAACTATAGTTCAAGAACCAAGTCCTGAGCCAAGTGAGGCATTGGATGAGAAGAAATTAGAGGCAATGAGATTGTATTGTTTTGAAGAACAAAGTACCTCAATGGAGGATCCATGGACTGCTTCATCCACTTCTGCAAGAGATTTGTATCCATTATATTTGGACTCTTCTTACTTAGACAAGAGAGATCATTAG 2382 0.3804 MNIYVHRILSSNNFTGELPATLANLTNLEDIRLGDNQFSGKIPDFIESWTNLKTLNIIGSGLSGPIPSAISKLRNLTDLILRSCNIHGTLQDYLSTMEISQILDLSFNKLTGPIPPSYKNLKQVNHIFLTGNLLNGSLPSIWKSDATSLDVSYNNFNQDNQQCQYGKVNLFAANSPTINNSGIVSCLRSSVSGCSKVNSIHINCGGTSLKVKGITYDEDFHEGTALFDRGQNRNWAISTTGDYMDVEAEHSTASLNDTSDLSFNDDHRQLYTNARISPISLTYYGFCLHDGNYKVNLHFAEIMFTNDQTYRSLGRRLFDIYIQGVVVEKDFNIAKEAGGVGKAIIKSYSAAVTNNTIEIRLYWAGKGTTTIPEKSVYGPLISAISVENENGDSLSTGAVIGIVAAVVIIIIILILGVLWWKGYLGKKKSSSREFMSLDIQTSLFSLRQIKAATNNFDITNKIGEGGFGPVYKGELPNGTIIAVKQLSSKSRQGNREFLNEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMQNNSLARALFGPKEHQIKLDWPTRQKICIGIARGLAYLHEESRLKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIISGSTNTTQRAKEKVIYLLDLARLLKEKGNLMELVDRRLGSNFDEEEAMIMIKVALLCTNVSPTLRPNMSSVVSMLEGKTIVQEPSPEPSEALDEKKLEAMRLYCFEEQSTSMEDPWTASSTSARDLYPLYLDSSYLDKRDH 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121530g00003 793 ProSiteProfiles Protein kinase domain profile. 456 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121530g00003 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Stsc121530g00003 793 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 425 531 - -
Stsc121530g00003 793 Pfam Malectin domain 199 384 IPR021720 -
Stsc121530g00003 793 SUPERFAMILY L domain-like 9 158 - -
Stsc121530g00003 793 SUPERFAMILY Protein kinase-like (PK-like) 430 730 IPR011009 -
Stsc121530g00003 793 FunFam Putative LRR receptor-like serine/threonine-protein kinase 532 739 - -
Stsc121530g00003 793 Gene3D Transferase(Phosphotransferase) domain 1 532 743 - -
Stsc121530g00003 793 Gene3D - 197 390 - -
Stsc121530g00003 793 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 6 90 - -
Stsc121530g00003 793 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 197 389 - -
Stsc121530g00003 793 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 755 - -
Stsc121530g00003 793 Gene3D Ribonuclease Inhibitor 5 191 IPR032675 -
Stsc121530g00003 793 Pfam Protein tyrosine and serine/threonine kinase 458 726 IPR001245 GO:0004672|GO:0006468
Stsc121530g00003 793 CDD STKc_IRAK 462 729 - -
Stsc121530g00003 793 Gene3D Phosphorylase Kinase; domain 1 422 531 - -
Stsc121530g00003 793 SMART serkin_6 456 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121530g00003 Stsc-Chr121530 7757 17022 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121530g00003 8 777 Receptor kinase-like Gene Family AT1G53420 54.883 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc121530g00003 PK_Tyr_Ser-Thr 8.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121530g00003 - - cam:101501658 1017.68