Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121504g00004 ATGACGGATTGGTTTTCAATTTCATTGGATCTGAATTCCATACACGAGGAACCTCAATTGGAAGAGCAAATGGAGTTTCTGTGTAATGTTGATGAAGAGTATGTCCCCAAGGTTGGGATGACATTTAAGTCATGTACAGAAGCTAGTGAATTCTACAAGGAGTATGCTAAACGAGCTGGATTTTCTTCCAAAATCCAAAATTCACAAAGGAATAAAGAGATCGATGCAATTAAGAATCAGCTCTTCACATGTAAGAGAGAGGGAAAAAGGAGATCTGACATCCCTGAGGCTGAAAAGACGAACCCCATGTCCCCGGCAAATTGTCCGGCAAGGATGTTCGTTCATATCGATAAGTTGACGCAACGTTATGTTATTTCCAAAGTTGTGCTGGAGCATTCGCATCCTTGTTCTGCCGATCTAGCAGAGATTCTACCTCAACATAGAGAACTCAGCATGTATGTTCATCACGTCATTGTGAACAACGATTAG 489 0.4131 MTDWFSISLDLNSIHEEPQLEEQMEFLCNVDEEYVPKVGMTFKSCTEASEFYKEYAKRAGFSSKIQNSQRNKEIDAIKNQLFTCKREGKRRSDIPEAEKTNPMSPANCPARMFVHIDKLTQRYVISKVVLEHSHPCSADLAEILPQHRELSMYVHHVIVNND 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121504g00004 162 Pfam FAR1 DNA-binding domain 50 136 IPR004330 -
Stsc121504g00004 162 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121504g00004 Stsc-Chr121504 7620 8724 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc121504g00004 FAR1 3.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121504g00004 - - aip:107614666 152.525