Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121498g00003 | ATGAAAGAAGTTAGGTTTTCATGGTTCATTCTTGTGCCATTGTTCATCACATTCTTGAACCATGCAAACTCCCAGTCTCAGCTTCTTCATGATCAAGAACACCAAGTCCTAATGAGGATCAAGGATTATTTTCATGACCCTACTTTTCTCAATCATTGGACCCCATCAAACTCTTCTTATTATTGTTCTTGGCCTGAGATCTCTTGCACCAATGGTTCTGTCACAGGACTAACTTTGGTTAATCTTAACATCATTCAAACAGTGCCACCTTTCATTTGTGATCTCAAGAACCTCTCACTTGTTGATTTCAGCAACAATTCAGTTCCTGGGGTGTTCCCAAGTTATCTCTATGATTGCTCCAAGCTTGAGTATCTTAATCTTTCTATGAACTTTTTTGTTGGTGAAATACCTCATGATATTGATACTTTGTCCAATTTGAAGTACCTTAACCTTAGTTATACCAATTTCACTGGTACCATTCCTTCCAGTGTTGGAAATTTGAAGGAACTAAGGTTCCTTGCTCTGCAAGATTGCCTGTTCAATGGTTCTCTCCCTGATGAGATTGGAAACTTGTCTAATCTTGAAACATTGGATTTGTCCGGTAACGAATTGCTTCCGCCTTCGAGGTTGCCGTTGAACTGGACAAATTTGAATAAGCTGAAGGTATTTTACATGTTTGAATGCAACCTGTTTGGTGAAATTCCTGAAAGAATTGGAGATATGGTTGCTTTGGAGGAGCTTGATTTGTCGCGGAACGATTTAACCGGAGGAATTCCAAGCAGTTTGTTCTTGCTGAAGAATCTGAGTGTTGTGTACCTTTGGAAGAACAAACTTTCTGGGGAAATACCATCAAAGATTGAAGCATTGAATCTGACCAACATCGCCTTATCACAGAACAGGCTTACAGGGAAAATACCAGAAGATTTTGGAAAGCTCCAAATGTTAATGGAATTCAAATTGAGCATCAATAACCTGTCAGGGGAGATACCACAAAGCATAGGGAGTCTTCCATCTCTGACCGATTTTGTTGTTATTATGAACAATCTATCAGGTACTCTTCCTCCCGAATTCGGCCGCTACTCCAAGCTTCAAAACTTTCAAATTTCATCCAACAATTTTACTGGAATGCTTCCAGAGAATTTATGCTATTATGGTGAATTAATTACATTAACTATTTATAAAAATAGCTTGAATGGTGAGCTGCCAGAGTCACTAGGAAATTGCAGTTCCCTGCAGTACCTGAAAATTTGGAGCAATGACTTTTCTGGTAACATTCCTAGTGGCCTTTGGAAATCTTCCAATTTGGTGAATTTCATGGTAAGCCATAATAGGTTCACTGGTGAGCTCCCGGATAAATTGTCACCGAGCATTGCTCTCTTCGACATAAGTTACAATCAGTTTTCTGGTAGAATTCCGACCGGGGTGTCGTCTTGGACTAATGTGGTAGAGTTTATTGCAAGCAGGAACTACTTCAATGGAACTATTCCTCATGAGCTAACAGAACTTCCCAAGTTAACACAACTTTTGCTTGATCAGAACAATCTCACTGGGACAATTCCTTCAGACATAGCCTCGTGGAACTCTCTAGTTACCCTAAATTTGAGCCATAACCACTTGTATGGGCAAATCCCAGATTCAGTTGGTCAATTACCTGCACTTTTAGAACTTGACCTCTCAGAGAATCAATTCTCTGGCCAAGTCCCTTCTCTTTCTTCAAGACTCACCAATCTCAATCTATCATCCAATCATCTGACTGGGAAAGTTCCAAGTGACTTTCAGAATTCTGCATTTGACACTAGCTTTTTGGATAACCCTGGCCTTTGTGCAGATAAAGCGGAACTGAACATCAAATTGTGCAATTCTGGCTCACAAAGTTCAAGGAAGGACTCATCATCATCTTGGTCCCCTGCTTTGATCATAGCCCTTGTTTTAGCAGTCTCATTACTCGCTATTGCGGTGTTATTCTTGCTTATCAGACTCATCAAGAAAGGAAAGCGAGTGCTGAATAACTCATGGAAGCTCACTTCATTCCAAAGGCTGAGCTTCACTGAATCAGATATAGTTTCTTCGATGACAGAACATAATATCATTGGCAGTGGAGGATATGGTACAGTTTACCGTGTCAATGTCAATGATTTTGGCTTTGTTGCTGTCAAAAAGATTTCTGGTAACGGAAGGCTAGACCGGAAGCTTGAGAATTCATTTCTCTCTGAAGTTAAGATATTAAGCAGCATTCGACATAGAAACATTGTGAAATTGTTGTGCTGTCCAGTCCAGCATAATCACGTTGCACTGAATTGGCCAAAGAGAATACAAATAGCCATTGGTGTTGCACAAGGATTGAGCTACATGCACCACGATTGCTCCCCGCCCATTGTTCATCGCGATGTGAAAACGAGCAACATACTATTGGATTATCAATTCAATGCAAAAGTTGCTGATTTTGGGCTAGCAAGGATGTTGATCAAGCCAGGGGAACTTGCCACCATGTCCACTGTTGTTGGCTCATTTGGATATCTTGCTCCAGAATACATTCAGACCACAAAAGTCAGTGAAAAGATTGATGTTTTCAGCTTTGGGGTTATCCTATTGGAGCTGACAACAGGTAAAGAAGCTAACTATGGAGATGAACACTCATCTCTTGCAGAATGGGCATGGAAACACTTTCAGTTTGGAAGCAACATAGAAGAGCTGCTTGACAAAGAAATCATGGAACCTGTTTACTTGGATGAGATGTGTCATGTTTTCAAACTTGGGGTGATGTGCACTTCAAAGCTTCCAGATACTAGACCTACCATGAAGGAGGCATTGCAAGCTTTGCTACAAAGTGGAGAATCATATGCTTTTGGAGAGAGGATTAGTGTTGGACACTATGATGCTGTTCCTCTTCTTAGAAACTCAAAAAGTGAGCATAGATTGGATATTGATGGTGACAGCTAG | 2940 | 0.4051 | MKEVRFSWFILVPLFITFLNHANSQSQLLHDQEHQVLMRIKDYFHDPTFLNHWTPSNSSYYCSWPEISCTNGSVTGLTLVNLNIIQTVPPFICDLKNLSLVDFSNNSVPGVFPSYLYDCSKLEYLNLSMNFFVGEIPHDIDTLSNLKYLNLSYTNFTGTIPSSVGNLKELRFLALQDCLFNGSLPDEIGNLSNLETLDLSGNELLPPSRLPLNWTNLNKLKVFYMFECNLFGEIPERIGDMVALEELDLSRNDLTGGIPSSLFLLKNLSVVYLWKNKLSGEIPSKIEALNLTNIALSQNRLTGKIPEDFGKLQMLMEFKLSINNLSGEIPQSIGSLPSLTDFVVIMNNLSGTLPPEFGRYSKLQNFQISSNNFTGMLPENLCYYGELITLTIYKNSLNGELPESLGNCSSLQYLKIWSNDFSGNIPSGLWKSSNLVNFMVSHNRFTGELPDKLSPSIALFDISYNQFSGRIPTGVSSWTNVVEFIASRNYFNGTIPHELTELPKLTQLLLDQNNLTGTIPSDIASWNSLVTLNLSHNHLYGQIPDSVGQLPALLELDLSENQFSGQVPSLSSRLTNLNLSSNHLTGKVPSDFQNSAFDTSFLDNPGLCADKAELNIKLCNSGSQSSRKDSSSSWSPALIIALVLAVSLLAIAVLFLLIRLIKKGKRVLNNSWKLTSFQRLSFTESDIVSSMTEHNIIGSGGYGTVYRVNVNDFGFVAVKKISGNGRLDRKLENSFLSEVKILSSIRHRNIVKLLCCPVQHNHVALNWPKRIQIAIGVAQGLSYMHHDCSPPIVHRDVKTSNILLDYQFNAKVADFGLARMLIKPGELATMSTVVGSFGYLAPEYIQTTKVSEKIDVFSFGVILLELTTGKEANYGDEHSSLAEWAWKHFQFGSNIEELLDKEIMEPVYLDEMCHVFKLGVMCTSKLPDTRPTMKEALQALLQSGESYAFGERISVGHYDAVPLLRNSKSEHRLDIDGDS | 979 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121498g00003 | 979 | SUPERFAMILY | RNI-like | 290 | 591 | - | - | |
Stsc121498g00003 | 979 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 30 | 189 | - | - | |
Stsc121498g00003 | 979 | FunFam | Putative leucine-rich repeat receptor-like protein kinase family protein | 190 | 287 | - | - | |
Stsc121498g00003 | 979 | Gene3D | Ribonuclease Inhibitor | 208 | 341 | IPR032675 | - | |
Stsc121498g00003 | 979 | Gene3D | Ribonuclease Inhibitor | 342 | 618 | IPR032675 | - | |
Stsc121498g00003 | 979 | Pfam | Protein kinase domain | 693 | 938 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc121498g00003 | 979 | SMART | LRR_typ_2 | 550 | 574 | IPR003591 | - | |
Stsc121498g00003 | 979 | SMART | LRR_typ_2 | 241 | 265 | IPR003591 | - | |
Stsc121498g00003 | 979 | SMART | LRR_typ_2 | 191 | 217 | IPR003591 | - | |
Stsc121498g00003 | 979 | SMART | LRR_typ_2 | 502 | 526 | IPR003591 | - | |
Stsc121498g00003 | 979 | SMART | LRR_typ_2 | 143 | 167 | IPR003591 | - | |
Stsc121498g00003 | 979 | Pfam | Leucine rich repeat N-terminal domain | 31 | 69 | IPR013210 | - | |
Stsc121498g00003 | 979 | SUPERFAMILY | Protein kinase-like (PK-like) | 685 | 940 | IPR011009 | - | |
Stsc121498g00003 | 979 | Gene3D | Transferase(Phosphotransferase) domain 1 | 673 | 758 | - | - | |
Stsc121498g00003 | 979 | FunFam | Receptor-like protein kinase HSL1 isoform A | 295 | 619 | - | - | |
Stsc121498g00003 | 979 | ProSitePatterns | Protein kinases ATP-binding region signature. | 697 | 720 | IPR017441 | GO:0005524 | |
Stsc121498g00003 | 979 | Gene3D | Ribonuclease Inhibitor | 28 | 207 | IPR032675 | - | |
Stsc121498g00003 | 979 | SMART | serkin_6 | 691 | 941 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc121498g00003 | 979 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 792 | 804 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc121498g00003 | 979 | Pfam | Leucine Rich Repeat | 244 | 262 | IPR001611 | GO:0005515 | |
Stsc121498g00003 | 979 | Pfam | Leucine Rich Repeat | 145 | 167 | IPR001611 | GO:0005515 | |
Stsc121498g00003 | 979 | Pfam | Leucine Rich Repeat | 573 | 594 | IPR001611 | GO:0005515 | |
Stsc121498g00003 | 979 | Gene3D | Transferase(Phosphotransferase) domain 1 | 759 | 955 | - | - | |
Stsc121498g00003 | 979 | ProSiteProfiles | Protein kinase domain profile. | 691 | 948 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc121498g00003 | 979 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 14 | 935 | - | - | |
Stsc121498g00003 | 979 | Pfam | Leucine rich repeat | 503 | 563 | IPR001611 | GO:0005515 | |
Stsc121498g00003 | 979 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 742 | 954 | - | - | |
Stsc121498g00003 | 979 | SUPERFAMILY | L domain-like | 36 | 375 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121498g00003 | Stsc-Chr121498 | 3732 | 7242 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121498g00003 | 33 | 964 | Receptor kinase-like Gene Family | AT5G25930 | 47.276 | 0.0 | 841 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Stsc121498g00003 | Pkinase | 2.8e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121498g00003 | - | - | gmx:100798963 | 1293.49 |