Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121491g00003 ATGGCAAAAATTATGTGGAATTCTAGTCCACCACCATCGCTTCTTTTCGCCATAACTCTTGCAATTTTACTCTCACAAAACCTTTTTGCTTATGCTTCAGATCAACCTTCCAAGAAGACCTTCATCATCCGTGTTGATTCTCAATCAAAGCCCTCCATTTTCCCTACACACTATCACTGGTACACTTCAGAGTTCACTGACCAAGACCGTATCCTCCATGTATACGACACCGTTTTCCATGGCTTCTCTGCTCTCCTCACGCATGACCAGGTCGCAACCATAAGCAACCACCCTTCGGTTCTCGCTGTTTTCGAGGACCGCCGTCGCCAACTCCACACAACTCGCTCCCCGCAGTTCCTTGGCCTCCGCAACCAACGTGGCCTATGGTCAGAGTCCGATTACGGCTCCGACGTCATCATCGGAGTCTTTGATACCGGTGTATGGCCGGAGCGACGGAGCTTCTCCGACTTGAACCTTGGCCCCATCCCTAGACGATGGAAAGGTGTATGTGAAACGGGAGCGAGATTCTCGCCAAGAAACTGCAACAAGAAGCTCATCGGAGCAAGGTACTTCTCCAAGGGACACGAAGCTGGTGCTAGTTCTGGTCCCTTGAATCCAATCAACGAAACTATCGAATTCCGTTCACCTCGCGACGCTGATGGCCATGGAACTCACACCGCTTCCACCGCAGCAGGTAGATACTCTTTCCAGGCTAACATGTCCGGTTACGCTTCAGGAATCGCCAAAGGCGTTGCTCCGAAAGCGCGATTGGCGGTTTACAAGGTTTGCTGGAAAAATGCTGGTTGTTTTGATTCTGATATCCTCGCTGCATTCGACGCCGCCGTCACCGATGGCGTTGATGTCATTTCTATTTCAATCGGTGGCGGTGACGGTATTGCCTCCCCTTACTACCTCGATCCCATTGCAATCGGCTCATACGGTGCCGTTTCCAGGGGAGTTTTTGTGTCCTCATCCGCCGGCAACGACGGACCTAGTGGAATGTCGGTGACGAACCTTGCTCCGTGGCTGACGACGGTGGGAGCTGGCACAATCGATCGCGATTTCCCCTCCGAGGTGATCCTCGGCAACGGAAAGACACTCTCTGGAGTTTCGCTCTATGCTGGAGCTCCATTGAGGGGGAGAATGTACCAATTAGTGTACCCTGGCAAATCTGGTGTTCTATCTGATTCACTCTGCATGGACAATTCACTGGATCCGAGACTCGTCAGAGGCAAAATCGTCGTTTGCGATCGCGGAAGCAGCCCTAGGGTTGCCAAGGGTTTGGTTGTGAAGAAAGCTGGTGGAGTTGGAATGATCCTCGCAAACGGAATCTCCAACGGCGAGGGTCTCGTCGGCGATGCTCACCTCATTCCAACGTGCGCCGTCGGCGCCGACGAAGGCGACATGATCAAATCCTACATCTCATCCACCGCAAACCCTACTGCAACTCTGGAATTCAAAGGAACGATCCTCGGAATCAAACCGGCTCCGGTTCTGGCATCGTTCTCTGCAAGAGGACCTAACGGCTTGAACCCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGGACCAACAGGACTCGATTCAGATTCCAGGAGAACCGAATTCAACATCCTTTCTGGAACTTCAATGGCTGCTCCTCACGTGA 1707 0.4974 MAKIMWNSSPPPSLLFAITLAILLSQNLFAYASDQPSKKTFIIRVDSQSKPSIFPTHYHWYTSEFTDQDRILHVYDTVFHGFSALLTHDQVATISNHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSESDYGSDVIIGVFDTGVWPERRSFSDLNLGPIPRRWKGVCETGARFSPRNCNKKLIGARYFSKGHEAGASSGPLNPINETIEFRSPRDADGHGTHTASTAAGRYSFQANMSGYASGIAKGVAPKARLAVYKVCWKNAGCFDSDILAAFDAAVTDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPSEVILGNGKTLSGVSLYAGAPLRGRMYQLVYPGKSGVLSDSLCMDNSLDPRLVRGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLIPTCAVGADEGDMIKSYISSTANPTATLEFKGTILGIKPAPVLASFSARGPNGLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDQQDSIQIPGEPNSTSFLELQWLLLT 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121491g00003 568 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Stsc121491g00003 568 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Stsc121491g00003 568 CDD Peptidases_S8_3 110 351 IPR034197 -
Stsc121491g00003 568 Pfam PA domain 384 468 IPR003137 -
Stsc121491g00003 568 Gene3D Peptidase S8/S53 domain 137 512 IPR036852 GO:0004252|GO:0006508
Stsc121491g00003 568 FunFam Subtilisin-like protease SBT1.9 29 112 - -
Stsc121491g00003 568 Gene3D - 352 491 - -
Stsc121491g00003 568 CDD PA_subtilisin_like 359 484 - -
Stsc121491g00003 568 SUPERFAMILY Protease propeptides/inhibitors 39 110 - -
Stsc121491g00003 568 Pfam Subtilase family 135 508 IPR000209 GO:0006508|GO:0008236
Stsc121491g00003 568 SUPERFAMILY PA domain 406 477 IPR046450 -
Stsc121491g00003 568 Coils Coil 542 545 - -
Stsc121491g00003 568 ProSiteProfiles Serine proteases, subtilase domain profile. 110 568 - -
Stsc121491g00003 568 FunFam subtilisin-like protease SBT1.5 352 491 - -
Stsc121491g00003 568 Pfam Peptidase inhibitor I9 40 112 IPR010259 -
Stsc121491g00003 568 SUPERFAMILY Subtilisin-like 111 507 IPR036852 GO:0004252|GO:0006508
Stsc121491g00003 568 MobiDBLite consensus disorder prediction 201 226 - -
Stsc121491g00003 568 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 112 IPR037045 -
Stsc121491g00003 568 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 64 512 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121491g00003 Stsc-Chr121491 13115 16108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121491g00003 18 512 Subtilisin-like Serine Gene Family AT4G34980 75.556 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121491g00003 - - gmx:100817537 866.3