Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121471g00002 ATGGCGAGAAGACAATCGCCACTGGTTAACCAAACAGTGGAGACTGGTTGCACGTCGCGAATGTTCGGAATTTTTAGTTTTCTTGGAGGTCAGTTCAACAGAAGATTGGTTTTCAATGGGAGGCATTTGAGTAGAGATGTCACTGATCCAGGAAACACAAGCTCCAGAAGCAGCTCAAGTGAGCTTAGTACAGTTGATGAAAAGTTCCCTCACACTAGTGTAAATTCTAGAAGAAGAAGAGATTATGGTTGCAAAAGTGTCAGTTGTGTGGAGAATGCTCAGGTGGCAGCAGATCAAGGAAATAAAGTGACAAAGATGACTATTGATCCAAAATTTGTCAATAAAAGCTATCTAAGCAAAGAAGGTGCAGAATGTCAACCTGATCAACTCTTGGATGCTTTACAGATATTATACTCAAACAAAGAGCTTTTCCTAAAACTTCTACAAGATCCAAACTCTCTGCTGGTGAAACAGATCAGTGGCTTACAGAGTTCTCAAGTGAATAAATGTCAAAACAATGTTGCAAGAAAATCTGGAAATACCGTTAAGTCTTCCTTTGATAAACATGATTCCAGTTCAAGTATTGAGCCAGGACTTCCAGAGAAAATAGTGGTTCTGAAACCTAGCACAAATAATGAGAATTTTTCTGCTGCCACTAGATTTGATAGTCCATGGCTGCATACTCGTCGAAGCTTGATCCATAATCCACAAAATCCAAAGTTTTCGCATTTTCCACTTGGTCATATAAAGAGGAAGCTGAGATATGTCACGAGAGCAAGGCGAAAAGAACAGAAGAAGACTGATGGAGTGCCTGATAAAGATCCCTGTGGTTGCAAGGCCTTTCAAGATGCCCAAAACATAAAGGAATTGAGAAGTGAGGGAAGAAATTCACTTGAGACTTCCCCTTCAATTATTGAGAAAAGGTTCAAGGATTCTGAATTATGCATGGGAAAGGAGGTTGCTTCGGTTAGTGAAAGTTACAATAGGATGACAGATAATGCTTCAGTCAGCCCTTGTGAGCAACATACACTGAACATACCTGTTAAAGATAGGAGAAGTCTATCTGTAAGGAGAAAGGAGCATCTTCCTAACTTTGAGTCCATATCAAGCTTGCGAAGGGACTATAATCATGGTTATATCAATGAAGGGATGAGATACTTGAACAACTATCAAATAGACCATAGAACCAAGATGGGGCTTGAGAAAGAAAGGGAAAGTATTTGTTCCTATAGATCTTTGGGACAGAAAAATGCACCAAGAGATACCATTAAGACATTTAGTGAGAAGTTGAAGCCTTTAGGTACTGATATTAGAACCGAAGAGAGTCTTCCTGGAGGCAATCTGCATGCACATTGTGATATTCCTAGAGATGATGGATATAATGACAGTCCAACTCAGAACTTCCACAAAAGCAATTCAACTAGAGGAATTAAACATTTTCAAGATTCACATCCAGAGATCCAAATTCTATCCTCTCCACCCAAAGTTGCTTCGTCGAGCCCTTTTTCCCCCGAAAGAACAGAAGACAGCATCGGCCTGAGTGACAAATTTGAGCACCCCAGCACTGAATCTGTTGTTGAGCTTTCCACATTACAACCAGATGAATATCCGGTACAAGCAGTACACAAACAAATCGAAGATAACCATTTTGCTGAACTTGTAAGATCCTCCTTAAATAGAACAAACAATCTAGCCTCCTCCAAGGACATCTTGGACTGCTCAAGGGAAATTGTGAAGGTTTTCAGCTTGAAATGGGATGAACTCATGATGAAGTGTGAATCAACAGACATGCATGATCCATCCGCATTTGATGAACTAAAAGGATCGATCGGCCATCTTTCTTGCAACGCAATCTTGCTTGACTGTGTCATGCAAGCATTCATGGAGGTATACCAGAAATGTGGTTTCTCACTTAACATTTTAAGTAAAGGTCCACACTTGCAGGCATATGTTGCAAAGAAAGTTCTGGCTCAAGAGATTGCTGAAGTGATTAAATTGCATTTTGTGCCTCATCCATCACAAATAACATTAGACCAGCTGGTTGGAAAGGACTTAGAGAGAAGTGAATCTTGGCTAAATATCCAATTTGATATAGAAGATATTGTGAAAGATGTGGAGGAAGATGTGCTTGAAGATTTGGTATTGGAAATGGTAGCTGAGATGGATATCAGAGACTTGAAAACTTTGCACTGA 2193 0.3995 MARRQSPLVNQTVETGCTSRMFGIFSFLGGQFNRRLVFNGRHLSRDVTDPGNTSSRSSSSELSTVDEKFPHTSVNSRRRRDYGCKSVSCVENAQVAADQGNKVTKMTIDPKFVNKSYLSKEGAECQPDQLLDALQILYSNKELFLKLLQDPNSLLVKQISGLQSSQVNKCQNNVARKSGNTVKSSFDKHDSSSSIEPGLPEKIVVLKPSTNNENFSAATRFDSPWLHTRRSLIHNPQNPKFSHFPLGHIKRKLRYVTRARRKEQKKTDGVPDKDPCGCKAFQDAQNIKELRSEGRNSLETSPSIIEKRFKDSELCMGKEVASVSESYNRMTDNASVSPCEQHTLNIPVKDRRSLSVRRKEHLPNFESISSLRRDYNHGYINEGMRYLNNYQIDHRTKMGLEKERESICSYRSLGQKNAPRDTIKTFSEKLKPLGTDIRTEESLPGGNLHAHCDIPRDDGYNDSPTQNFHKSNSTRGIKHFQDSHPEIQILSSPPKVASSSPFSPERTEDSIGLSDKFEHPSTESVVELSTLQPDEYPVQAVHKQIEDNHFAELVRSSLNRTNNLASSKDILDCSREIVKVFSLKWDELMMKCESTDMHDPSAFDELKGSIGHLSCNAILLDCVMQAFMEVYQKCGFSLNILSKGPHLQAYVAKKVLAQEIAEVIKLHFVPHPSQITLDQLVGKDLERSESWLNIQFDIEDIVKDVEEDVLEDLVLEMVAEMDIRDLKTLH 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121471g00002 730 MobiDBLite consensus disorder prediction 491 518 - -
Stsc121471g00002 730 MobiDBLite consensus disorder prediction 43 74 - -
Stsc121471g00002 730 MobiDBLite consensus disorder prediction 46 70 - -
Stsc121471g00002 730 Pfam Domain of unknown function (DUF4378) 580 716 IPR025486 -
Stsc121471g00002 730 Pfam Protein of unknown function (DUF3741) 109 153 IPR022212 -
Stsc121471g00002 730 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 97 721 - -
Stsc121471g00002 730 MobiDBLite consensus disorder prediction 491 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121471g00002 Stsc-Chr121471 8177 11089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121471g00002 577 726 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 29.605 9.04e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121471g00002 - - adu:107479933 1114.75