Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121467g00002 ATGTCTTCTGGTCTGTATTCTTTTGACACCACTTTCCAAGCACATTCAAGCTCAGACATGGCCACTGCTGATGGAGGAGGCGGAGTTGGGGACCTTGCTTTTCTCAGTGACTCTTTTCCTTTCTTAGGAAACAGCACTGATGTTGGTCATCAACACTGTTCAAGCAACCAAAACATTTTAGATGAGGCCACTCTTTCTTCTTCTTCTTCTGCTGTTGACCCTTTTTCATCTTGCTTCTTTTCTTTCTCTCCTCCAAGTACACACTTAGAAAACCTCAGCCTTCAGGCCAATAGCAACAAGAACAACCGTGTTTGTCCCACTTTGGAGAGTGATTTTGCAAGCTTCTCATCGGGTTTTGATTTGACACAAGCTGTGAAGAGTGAGGAGTGCCAAATCGGTAGTTTTGAACTTGATTATGGATATGGATATAATGATCATAATCAGCAACACTTTTTTCCCCACAGTTATAGCGGTGCTGAGAATGTGGCAAAATACATGCAGAGGAGTTTCAGCAGCAACTCCTTTCATTGCAAGCCTGGGAATTTTCTGTTCCAAAATAATCACTCTGAGTCTGACACACACAATAACAATAATAGTAATAATAACATGGACTCTACAAATTTTCAAAAGCATGATGCGAGTTCACCTGAAAACAGTGGCTTCAATGGAAAAATGAGAAGGGTGTGCAGCACTGGAGATTTGCAGAAGTGTCAAAGGGAAGGATCATTGTTGGAGGAAGCAAATTTCAAAGTAGGGCGATACAGTGCTGAAGAGAGAAAGGAAAGAATTTCAAAATACAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAAACCATCAAGTATGCATGCCGAAAAACACTAGCCGACAATCGACCACGCATACGTGGCAGATTCGCACGCAACGATGAGTCCAGCGACATTATTCCTATTCCAAATCCTAAGCAGGTTCCATTTTCAGCCCGAGATGATGAAGATGAAGAAGTCGATTTCTGGATTGAAGGGTTGCAGTTGCATGAAGAGCAGGAGGATGTAGCAGTCAACAACGCTTATAATTATGCTTCTAATCACTTTCAATACTGCCGTTTCTAA 1089 0.4215 MSSGLYSFDTTFQAHSSSDMATADGGGGVGDLAFLSDSFPFLGNSTDVGHQHCSSNQNILDEATLSSSSSAVDPFSSCFFSFSPPSTHLENLSLQANSNKNNRVCPTLESDFASFSSGFDLTQAVKSEECQIGSFELDYGYGYNDHNQQHFFPHSYSGAENVAKYMQRSFSSNSFHCKPGNFLFQNNHSESDTHNNNNSNNNMDSTNFQKHDASSPENSGFNGKMRRVCSTGDLQKCQREGSLLEEANFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDESSDIIPIPNPKQVPFSARDDEDEEVDFWIEGLQLHEEQEDVAVNNAYNYASNHFQYCRF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121467g00002 362 ProSiteProfiles CCT domain profile. 259 301 IPR010402 GO:0005515
Stsc121467g00002 362 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 64 329 IPR045281 GO:0009909
Stsc121467g00002 362 MobiDBLite consensus disorder prediction 186 224 - -
Stsc121467g00002 362 Pfam CCT motif 259 301 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121467g00002 Stsc-Chr121467 16586 18207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121467g00002 255 308 C2C2-CO-like Transcription Factor Family AT5G24930 49.123 2.31e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc121467g00002 CCT 9.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121467g00002 - - adu:107479916 533.487