Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121466g00002 ATGGGTAATGTTGATTATTCATCTTACCCTTCACCTATGAATAATGAGGGTGAACAACATCCTCGCGTGGCTGTTCCACCTCCACAACCATTTATCAAGTCTCTAAAATACTCATTGAAAGAGACATTCTTTCCCGACGACCCGTTGAGGAGGTTCAAGAACCAACCGCCTTCAAGGAGGCTGATTCTTGGACTCCAATACTTCTTCCCGATATTCGAGTGGGGTCCGAATTATACCTTTCAGTTCTTGAAATCCGACCTCATCGCTGGAATCACCATTGCTAGCTTGGCCATACCTCAAGGAATCAGCTATGCTAAGCTTGCAAACTTGCCTCCAATTCTTGGACTATATTCAAGTTTCATACCACCATTGATTTATGCAATGATGGGAAGCTCAAGGGACTTAGCTGTGGGAACTGTGGCAGTTGGATCTCTTCTTTTGGGTTCAATGTTGTCAACTGAAGTTAATCCAACTCAGAATCCAAAGCTTTTTCTCCATCTTGCTTTCACTGCTACTTTCTTTGCTGGAATTTTCCAAGCTTCACTGGGTGTTTTCAGGCTAGGGTTTATAGTGGATTTTCTGTCACATGCAACAATAGTAGGGTTCATGGGAGGAGCAGCCACTGTGGTATGCTTACAACAGCTGAAATCAATTCTTGGTCTTGAACATTTCACTCACAATGCTGATATCATCTCAGTTATGCGCTCTGTTTTTTCCCAAACTCATAAGTGGAGATGGGAGAGCGCAGTGTTAGGATTTACCTTCATTTTCTTCCTCCTTCTCACAAGATATTTTAGCAAAAGAAAACCAAAGTTCTTTTGGGTATCAGCAATGGCACCGTTAACGTCCGTTATATTGGGGAGCTTTCTCGTTTATTTCACTCACGCTGAGAACCACGGCGTTCAAGTGATAGGAGAATTGAAGAAAGGGCTGAATCCACCATCAGTGACAGATTTGGTGTTTGTGGCACCACACATGAGCACAGCAATAAAAACAGGGATTCTTGTTGGAATCATAGCACTTGCAGAAGGCATAGCAGTTGGAAGAAGCTTTGCAATGTTTAAGAATTACCACATTGATGGCAACAAAGAGATGATAGCCATTGGCACCATGAACATTCTTGGTTCTTTCACTTCTTGCTACCTCACAACTGGGCCATTCTCACGTTCAGCTGTCAACTACAATGCTGGATGCAAGACAGCAGTATCAAACATAGTGATGTCAATTGCAGTGATGCTAACGTTGTTGTTCTTAACACCATTGTTCCATTACACTCCCCTTGTGGTCCTAGCAGCCATTATTGTGTCTGCAATGCTTGGTCTCATAGATTATGAAGCTGCAATTCATCTCTGGAAGATTGATAAGTTTGACTTTGTTGTGTGCATCAGTGCATACATTGGTGTGGTTTTTGGTAGCGTTGAAATTGGCCTTGTCATCGCGGTTGCATTGTCTGTGCTTAGGATACTTCTATTTGTTGCAAGGCCAAGGACATTTGTTTTAGGGAACATTCCAAATTCTGGTATATACAGAAATGTTGAGCACTACCAAAATGCAAATCATGTTCCTGGAATCCTAATTCTAGAGATTGATGCACCAATTTACTTTGCCAATTCAAGCTATTTAAGAGAGAGGATCACAAGGTGGATTGATGATGAAGAAGATAGAATCAAAGCTAATGGGGAGACAAGTTTGCAGTATGTTATATTGGATATGAGTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAAGTCAACAAGATTACAGACAGAAGAGGGCTACAACTTGTTATGGTCAATCCTGGAAGTGAGGTAATGAAAAAACTCAACAAATCAAAATTCCAAGAGAACATTGGTGAAAAATGGATATATCTGACAGTTGAACAAGCTGTTGAAGCATGCAACTTCATGTTGCATACATGCAAATCAAATTCCAAGAGAGATGAATCACAAGGTTGGAACAAAGTCTGA 1980 0.4116 MGNVDYSSYPSPMNNEGEQHPRVAVPPPQPFIKSLKYSLKETFFPDDPLRRFKNQPPSRRLILGLQYFFPIFEWGPNYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLLGSMLSTEVNPTQNPKLFLHLAFTATFFAGIFQASLGVFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHNADIISVMRSVFSQTHKWRWESAVLGFTFIFFLLLTRYFSKRKPKFFWVSAMAPLTSVILGSFLVYFTHAENHGVQVIGELKKGLNPPSVTDLVFVAPHMSTAIKTGILVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNILGSFTSCYLTTGPFSRSAVNYNAGCKTAVSNIVMSIAVMLTLLFLTPLFHYTPLVVLAAIIVSAMLGLIDYEAAIHLWKIDKFDFVVCISAYIGVVFGSVEIGLVIAVALSVLRILLFVARPRTFVLGNIPNSGIYRNVEHYQNANHVPGILILEIDAPIYFANSSYLRERITRWIDDEEDRIKANGETSLQYVILDMSAVGNIDTSGISMLEEVNKITDRRGLQLVMVNPGSEVMKKLNKSKFQENIGEKWIYLTVEQAVEACNFMLHTCKSNSKRDESQGWNKV 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121466g00002 659 PANTHER SULFATE TRANSPORTER 33 645 IPR001902 GO:0016020|GO:0055085
Stsc121466g00002 659 Pfam Sulfate permease family 83 463 IPR011547 GO:0016020
Stsc121466g00002 659 Gene3D STAS domain 494 639 IPR036513 -
Stsc121466g00002 659 ProSiteProfiles STAS domain profile. 514 637 IPR002645 -
Stsc121466g00002 659 MobiDBLite consensus disorder prediction 1 15 - -
Stsc121466g00002 659 SUPERFAMILY SpoIIaa-like 519 637 IPR036513 -
Stsc121466g00002 659 FunFam Sulfate transporter 31 494 640 - -
Stsc121466g00002 659 CDD STAS_SulP_like_sulfate_transporter 515 630 - -
Stsc121466g00002 659 NCBIfam sulfate permease 70 633 IPR001902 GO:0016020|GO:0055085
Stsc121466g00002 659 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Stsc121466g00002 659 MobiDBLite consensus disorder prediction 1 23 - -
Stsc121466g00002 659 Pfam STAS domain 515 633 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121466g00002 Stsc-Chr121466 20988 26302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121466g00002 14 652 Inorganic Solute Cotransporters AT4G02700 68.281 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121466g00002 K17471 - gmx:100787694 1112.83