Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121464g00004 ATGGAAGAAATATCTTCTAGTGTTGCAGTGCCATTTACAATTGGGAACTTGATTCAAAAGGAGTCAGCGGTGGCAACCCACGTGGAGATAACTGGGATAAAGCTTATGGCAAATACAGCTGCAGCTTTAATATTAAATCCTTCAGTGGAAGGTTGCCAACCATACTCTGTTGGAAGTGATAATCATTCTGATGTTAGTCTCAAACATCAGATTAAGGTGTCTGCAGAGATGAAAGAGAACGAAGTTGGACCTGCCGTTGTCTCAGAAATGGTTATTGAATGTGACAGTAATTGGGTCTTGAGAGAAAGCTATAACCCAGCAAGGAAGGAAGATGAATTCATGCTGGCTGTTGATTTTCAATGTCTACATAGTTCAAGCTCCAATGACAAACGCAGCCCCTCTGTGGAGGAAGCTGCATCCTTGAAGGCTATTTATTCAGAGATAGATTCACCAGTTATCATTGAGGTTGATGATAAAATTTATGGTGAGTGTGGATTAAACGAGTCGCATCCAGCACTGCAGCCAGAGGAGAACACAGTTTCTGTTGCAATGGATCTTGAGAGTGAGGATCCAAAGCTTTTTGCTGCATCTCTTGACCAGTCCAACAGAACAAGCAACCAGAATGCTTCGGAAGTGAGTAGTCGTCTTCTCTGCGGTTATTCATCAATCTGTGGGAAAAGATCGGAGATGGAAGATGCTATAGCTGTTAAGCCTAAACTTATTCAAGTCCCTTCACAGATGCTAACAGATAGCCATGTAAACGAAAACACAATATCCTCATTAGCCCACTTTTTTGGTGTCTATGATGGACATGGAGGCTTTCAGGTTGCCAATTACTGCCGGGAACGCCTGCATTCAGCTTTGATTGAGGAGATAGAAGCTGCAAAATCATGTTTAGCAGAAACAGATGGGGGAGATTATTCGCAGGACCATTGGAAGAAAGCATTTGTAAGTTGTTTTCAGAAAGTAGATGATGAAGTTGGAGGAATTCGAGCTGGTGATGGCAGAAATAACAGTGGTGGATCTGAGTCTACAATTGAACCAATTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCTGTTTTGAGTCAATCACACATAATAGTCGCAAATTGTGGGGATTCAAGAGCCGTCTTGTATCGCGGAAAAGAAGCCATCCCATTGTCTGCTGACCACAAACCAAACAGAGAGGATGAGTGGGCAAGGATAGAAGCTGCAGGAGGAAGGGTCATACATTGGCAAGGGTACCGAGTTCTTGGTGTTTTGGCAATGTCAAGATCCATAGGGGATAGGTACTTGAAACCATGTATTATACCAGAACCAGAAGTGAAGTTTGTGCATAGAGAGAAACATGACGAGTGCCTTATTCTAGCTAGTGATGGTTTATGGGATGTGGTGACAAATGAAGAAGCTTGTGAAGTTGCACGGAAGAGAATCCTTCTTTGGCACAAGAAATACGGCGACAATGCGGCGATGACCGAGCAAGTTGAAGAAGGAGTTGACCCTGCAGCTCACTCTGCTGCAGAGTATCTCTCTAGACTCGCCCTCCAAAGGGGAAGCAAAGATAACATCTCTGTAATTGTGATAGACTTGAAGGCTCAAAGAAAAATTAAGAGAAAAGCATAA 1629 0.4346 MEEISSSVAVPFTIGNLIQKESAVATHVEITGIKLMANTAAALILNPSVEGCQPYSVGSDNHSDVSLKHQIKVSAEMKENEVGPAVVSEMVIECDSNWVLRESYNPARKEDEFMLAVDFQCLHSSSSNDKRSPSVEEAASLKAIYSEIDSPVIIEVDDKIYGECGLNESHPALQPEENTVSVAMDLESEDPKLFAASLDQSNRTSNQNASEVSSRLLCGYSSICGKRSEMEDAIAVKPKLIQVPSQMLTDSHVNENTISSLAHFFGVYDGHGGFQVANYCRERLHSALIEEIEAAKSCLAETDGGDYSQDHWKKAFVSCFQKVDDEVGGIRAGDGRNNSGGSESTIEPIAPETAGSTAVVAVLSQSHIIVANCGDSRAVLYRGKEAIPLSADHKPNREDEWARIEAAGGRVIHWQGYRVLGVLAMSRSIGDRYLKPCIIPEPEVKFVHREKHDECLILASDGLWDVVTNEEACEVARKRILLWHKKYGDNAAMTEQVEEGVDPAAHSAAEYLSRLALQRGSKDNISVIVIDLKAQRKIKRKA 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121464g00004 542 Gene3D - 204 542 IPR036457 -
Stsc121464g00004 542 FunFam Protein phosphatase 2C 16 205 542 - -
Stsc121464g00004 542 ProSiteProfiles PPM-type phosphatase domain profile. 217 532 IPR001932 -
Stsc121464g00004 542 SMART PP2C_4 207 530 IPR001932 -
Stsc121464g00004 542 PANTHER PROTEIN PHOSPHATASE 196 532 IPR015655 GO:0004722|GO:0006470
Stsc121464g00004 542 Pfam Protein phosphatase 2C 221 525 IPR001932 -
Stsc121464g00004 542 SUPERFAMILY PP2C-like 208 533 IPR036457 -
Stsc121464g00004 542 CDD PP2Cc 218 532 IPR001932 -
Stsc121464g00004 542 ProSitePatterns PPM-type phosphatase domain signature. 264 272 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121464g00004 Stsc-Chr121464 9670 12999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121464g00004 202 541 PP2C-type Phosphatase Gene Family AT4G26080 59.884 1.89e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121464g00004 K14497 - gmx:100802159 711.064