Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121464g00003 ATGAACATCGAGGAGTCTATGCGAAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCACAATGTCCTTTTGTTGTTGTCTGCTACCAGTCATTCTATGTCAATGGTGTTATATCAATCATCTTAGAGTACATGGACGGAGGGTCCTTAGCGGATCTTCTGAAGAAAGTCAAAACAATTCCAGAGCCTTATCTTGCAGCCATCTGTAAACAGGTTCTGAAGGGATTAATGTATCTTCACCATGAAAAACATATTATCCACAGAGACTTGAAACCTTCTAATTTGTTGATAAATCATAGAGGTGAAGTAAAGATTACTGATTTTGGTGTGAGTGCAATTATGGAAAGTACATCTGGTCAAGCTAATACTTTCATCGGCACATTCAACTATATGTCTCCGGAGAGGATCAATGGTAGCCAGCGTGGCTATAACTACAAAAGTGATATATGGAGCTTGGGATTAATATTGCTCGAGTGTGCTATGGGTAGATTTCCATACACACCACCAGATCAAAGTGAGAGATGGGAAAGTATTTTCGACCTTATTGAAACCATTGTAGATAAACCTCCTCCTACTGCTCCATCAGAACACTTTTCTACAGAATTTTGCTCATTTATATCAGCATGCTTACAGAAAGACCCTAAGGATAGACTATCAGCTCAGGAACTTATGGGACATCCTTTTGTCAGCATGTACGATGACTTGCATGTAGATCTTGCAGCATACTTCTCAAATGCAGGATCTCCACTTGCAACCTTATAG 765 0.3948 MNIEESMRKQIAQELKINQSAQCPFVVVCYQSFYVNGVISIILEYMDGGSLADLLKKVKTIPEPYLAAICKQVLKGLMYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTFNYMSPERINGSQRGYNYKSDIWSLGLILLECAMGRFPYTPPDQSERWESIFDLIETIVDKPPPTAPSEHFSTEFCSFISACLQKDPKDRLSAQELMGHPFVSMYDDLHVDLAAYFSNAGSPLATL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121464g00003 254 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121464g00003 254 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Stsc121464g00003 254 CDD PKc_MAPKK_plant_like 1 234 - -
Stsc121464g00003 254 SMART serkin_6 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121464g00003 254 FunFam Mitogen-activated protein kinase kinase 6 49 249 - -
Stsc121464g00003 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Stsc121464g00003 254 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 246 - -
Stsc121464g00003 254 SUPERFAMILY Protein kinase-like (PK-like) 5 238 IPR011009 -
Stsc121464g00003 254 Pfam Protein kinase domain 4 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121464g00003 254 PIRSF ILK 3 226 - -
Stsc121464g00003 254 Gene3D Transferase(Phosphotransferase) domain 1 48 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121464g00003 Stsc-Chr121464 6805 9490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121464g00003 1 253 MAP Kinase Kinase Gene Family AT4G26070 66.016 3.73e-127 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Stsc121464g00003 Pkinase 3.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121464g00003 K20603 - gmx:100789734 483.411