Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121455g00002 ATGACTACCCAACATGAAGATACACTATTCCTTCTCAAAGAAACCACTGCGTCCATTTTGATCTTCCTTATCACCCATCTCTTCTTCCGTTCAATTATCCTCCGAAACCGTCACGGGAACCGGAAAGTTCTTCCACCTGGCCCAAGGGGGTGGCCAGTTGTTGGGGCACTCCCACTCATGGGAAACATGCCTCACGTCACACTCTCCGAATTGGCCAAAAAATACGGGCCTGTAATGTACCTGAAGATGGGCTCAAACAACATGGTTGTGGCTTCGAGTCCCAGCGCGGCCCGGGTTTTCCTGAAAACCCTTGAACCAAACTTCTCGAACCGGCCTCCAAATGCGGGTGCAACTCACTTAGCTTATGACTCGCAGGACATGGTGTTTGCTGATTATGGAGCCAGGTGGAAGTTGCTTAGGAAACTAAGCAACTTGCACATGCTTGGTGGAAAGGCTCTCAACGATTGGGCTCATGTTCGTGAGAGAGAGATGGGGTACATGCTTGGTGCAATGCACGACTGCAGCAAGAAGGGCCAGGCGGTGGTGGTGGCGGAGATGCTAACATATGCCATGGCTAACATGATAGGCCAAGCGATACTAAGCCAGCGCGTGTTCCATAAAAAGGGAACCGAGTCAAATGAGTTCAAGGACATGGTGGTTGAGCTCATGACTGTTGCTGGGTACTTCAACATTGGAGATTTCATTCCTTTGTTGGCGTGGCTGGATCTGCAAGGAATAGAGCGAGGGATGAAGAGCTTACACAAAAAGTTTGATGCATTATTGACGAGGATGATTGAGGAACATGCAGCTTCTAGTCATAAGCGTAAGGCTAAACCTGATTTCTTGGACGTTCTCATGGCTCATCGTCATCACAGTGAAAACTCTGATGGTGGGGATAATTTGACCTTAACCAACATCAAGGCTCTCCTCTTGAATCTATTCACAGCGGGCACTGATACATCGTCGAGTACCATAGAGTGGGCACTAGCAGAGATCCTAAGAAAACCCATTATCATGAAGAAAGCTCAAGAAGAAATGGACAAAGTGATAGGAAAGCAGAGAAGGCTGAAAGAATCTGACATCGAAAACCTTCCATACTTACAGGCCATATGCAAAGAGACGTATAGAAAGCACCCATCAACACCACTGAATCTGCCTCGAATCTCATCTGAGCCATGCCAAGTGAACGGCTATCACATCCCCAAGAACACCAGGCTCCTTGTGAACATATGGGCCATAGGGCGCGACCCTCAGGTGTGGGAGAACCCTTTAGAGTTCAAGCCGGAGAGGTTTTTGGGTGGAAAGAATGAAAAGATCGATCCGCGCGGAAACAATTTTGAGTTGATTCCATTTGGTGCTGGGAGAAGGATTTGCGCCGGGACAAGGATGGGGATTGTGCTTGTTCAGTACGTTTTGGGTACTTTGGTACATTCCTTTGATTGGAAGCTTCCAAATGGGGTTGTGGAATTGAACATGGAAGAATCCTTTGGGCTTGCCTTGCAGAAGAAGGTCACTCTTGCTGCTATAGTTAGCCCTAGGTTGCAACAGAGTGCTTACATTCCTTAG 1566 0.4796 MTTQHEDTLFLLKETTASILIFLITHLFFRSIILRNRHGNRKVLPPGPRGWPVVGALPLMGNMPHVTLSELAKKYGPVMYLKMGSNNMVVASSPSAARVFLKTLEPNFSNRPPNAGATHLAYDSQDMVFADYGARWKLLRKLSNLHMLGGKALNDWAHVREREMGYMLGAMHDCSKKGQAVVVAEMLTYAMANMIGQAILSQRVFHKKGTESNEFKDMVVELMTVAGYFNIGDFIPLLAWLDLQGIERGMKSLHKKFDALLTRMIEEHAASSHKRKAKPDFLDVLMAHRHHSENSDGGDNLTLTNIKALLLNLFTAGTDTSSSTIEWALAEILRKPIIMKKAQEEMDKVIGKQRRLKESDIENLPYLQAICKETYRKHPSTPLNLPRISSEPCQVNGYHIPKNTRLLVNIWAIGRDPQVWENPLEFKPERFLGGKNEKIDPRGNNFELIPFGAGRRICAGTRMGIVLVQYVLGTLVHSFDWKLPNGVVELNMEESFGLALQKKVTLAAIVSPRLQQSAYIP 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121455g00002 521 PANTHER CYTOCHROME P450 98A9 17 519 - -
Stsc121455g00002 521 CDD CYP75 76 513 - -
Stsc121455g00002 521 Gene3D Cytochrome P450 35 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 FunFam Flavonoid 3',5'-hydroxylase 2 36 510 - -
Stsc121455g00002 521 Pfam Cytochrome P450 45 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 SUPERFAMILY Cytochrome P450 45 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 Coils Coil 339 359 - -
Stsc121455g00002 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Stsc121455g00002 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121455g00002 521 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121455g00002 Stsc-Chr121455 1132 6070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121455g00002 8 519 Cytochrome P450 AT5G07990 50.290 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121455g00002 K13083 - gmx:547705 837.025