Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121447g00001 ATGAATACTATTATCTTCTTCATCTTCTGCTTCTGCTTATTATGCATTCAAACTCATCACGTATCATCGTCATCTTCCGAATCAAACAATATATTCCCCAAAGAAGCTCACCCCACAAAATCTGGTTACCTTCCAGTAAGTACCACTTCTTCCTCTGCTATCTTCTATGCTTTCTATGAAGCTCAGAACTCGACCGTACCTCTCTCCGAAACCCCACTTATCATTTGGCTCCAAGGTGGCCCTGGTACCTCCTCCATGATTGGCAACTTCTATGAGATTGGACCATGGCGTATCACAGAATCCATCACTCTTGAACCCAACCCTGGTTCTTGGAACAACTACTTTGGCCTTCTCTTTCTTGATAATCCCATTGGCACTGGATTCAGTATAGCCTCATCGCCACAAGAAATCCCAACAGATCAACAAGGTATTGCAGAACACCTTTTTGCTGCTATTACACGGTTTCTTCAACTTGATCCTGTTTACAAACACCGCCCTATTTATATTAATGGCCAAAGCTATGGTGGAAAGTGTGCCTCTTCAACTGGATTCTATATATTGAAAAGAAATGCACAGTTGCGTGCTCCTCAAAGAGTTAATTTGGCTGGTGTTGTTATTGGAGACGGTTTAATTGAGCTTCAAACCCAATTAGGCACAAGACATGCCAATGCTTATTACTTGGGTTTGATCAATGAAAAGCAACTGAAAGAGCTGGAGAAAGACCAATTGGAAGTAGTTAAGTTCACACAGACTCTGCAATGGGGCAGAGCAACGGATGCAGCGGGAAGACTCACGGCCAAGTTGCAAAACATGACAGGGTTGGCTACTTTGAGTGATTACACAAGAAAAGACCATCCATATCACTATGAAGATTGGGTTACTCAATTCTTGAACATAGCGGAGGTGAAGAAGGCACTGGGAGTGAATGAATCGCAAGTGTTTAAAGCTAGCAGCAGTGATGTTGTGGCTGCATTACATGATGACGTACCGAAGAGTGTCAAGTCTATGGTGGAGGTGTTGTTGAAGAGCAACAGTATTAGGGTGTTGTTGTACCAAGGTCAATATGATTTGCTTGCTGGTCCAGTGCAAATTGAGGCAGTGGTGAAGCTTTTGAAATGGGAAGGGATTGAGGAGTATATGAATGCAGAGAGGAAGATATGGAAAGTGAATGGAGAGCTTGCTGGTTATGTCCAACAATGGAAGTCACTTACCAATGTTGTTGTCTTGGGTGGTGGCCATCTTATGCCTGCTGACCAGCCTCTGAATGCTAAGGCAATGATTGAAGATTGGGTCTTGCAAAGGGGTTTGTATCAAAGTGCGTAA 1323 0.4324 MNTIIFFIFCFCLLCIQTHHVSSSSSESNNIFPKEAHPTKSGYLPVSTTSSSAIFYAFYEAQNSTVPLSETPLIIWLQGGPGTSSMIGNFYEIGPWRITESITLEPNPGSWNNYFGLLFLDNPIGTGFSIASSPQEIPTDQQGIAEHLFAAITRFLQLDPVYKHRPIYINGQSYGGKCASSTGFYILKRNAQLRAPQRVNLAGVVIGDGLIELQTQLGTRHANAYYLGLINEKQLKELEKDQLEVVKFTQTLQWGRATDAAGRLTAKLQNMTGLATLSDYTRKDHPYHYEDWVTQFLNIAEVKKALGVNESQVFKASSSDVVAALHDDVPKSVKSMVEVLLKSNSIRVLLYQGQYDLLAGPVQIEAVVKLLKWEGIEEYMNAERKIWKVNGELAGYVQQWKSLTNVVVLGGGHLMPADQPLNAKAMIEDWVLQRGLYQSA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121447g00001 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Stsc121447g00001 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 403 416 IPR001563 GO:0004185|GO:0006508
Stsc121447g00001 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Stsc121447g00001 440 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Stsc121447g00001 440 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 420 IPR001563 GO:0004185|GO:0006508
Stsc121447g00001 440 Gene3D alpha/beta hydrolase 17 438 IPR029058 -
Stsc121447g00001 440 SUPERFAMILY alpha/beta-Hydrolases 38 432 IPR029058 -
Stsc121447g00001 440 Pfam Serine carboxypeptidase 38 431 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121447g00001 Stsc-Chr121447 14427 15800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121447g00001 296 431 Calmodulin-binding Proteins AT2G22960 22.628 5.97e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121447g00001 K09645 - gmx:100780822 573.548