Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121446g00004 ATGGAGTTCTGGGGTGTTGAGGTTAAGCCAGGGGATAGCGTTAAAATTAACCAGTTGGAAGTTTTTAATGCCTACATCCACATCTCTCAGGTTGCGTTGGGAGAGGCTGGAAAGAATGAGAAATCCAATGATCCTGTGGTTATCTACCTCAAAGTTGGAGAGCAGAAGCTTGTTCTCGGAACTCTGAACAGGGCGGAAATCCCTCAAATACCCTTGGATTTGGTTCTCGACCAAGAAGCTGAGCTTTCCCACACTTGCAAGAGTGCCAGTGTATATTTCACTGGATACAGGGCTGAACGTGATGTGGGAGGACCTGGTGAGTTTGATTCTGATGACTTTTCAGAGAGTGATGAGGAAGAGGCTGCGTTGAATGTCAAAGATAATGGAAAACTTGAAATCAAGACTGAAAAGGTAAAGATTCCTGAGCTGAAAAAGGATGTGAGTGGTGTTGCAGCCAAGAAACCCAATGTTGCTGTTCCAAAGAAAGATGAAGAGGATGAGGACTCTGATGAGGATGATGATGACTCAGATGATGAGTCTGATGATGATGATGAATCTGGAAGTGAGATGGATGCTGATAGTGATGATGAGAGCGATGACGATGAAGAGACACCTGTGAAGAAGGTGGACCAGGGCAGGAAGAGACCAAACACTCCTGCATCCAAAACCCCGGTTCCTTATGCTAAGAAAGCTAAAAATGTGACTCCTGAGAAGTCTGGTGGCAAGAAAAATGCACATACACCAACTCCTCACCCTGCAAAGAAGGGTGGAAATCCCAACAGCGCAGGGAAGTTCCAGTCACCCAAACCAGGATCACAACAGCAGAAAAAGAGTGGAGGAAAGAAGGGTGGTCGTTGA 858 0.4592 MEFWGVEVKPGDSVKINQLEVFNAYIHISQVALGEAGKNEKSNDPVVIYLKVGEQKLVLGTLNRAEIPQIPLDLVLDQEAELSHTCKSASVYFTGYRAERDVGGPGEFDSDDFSESDEEEAALNVKDNGKLEIKTEKVKIPELKKDVSGVAAKKPNVAVPKKDEEDEDSDEDDDDSDDESDDDDESGSEMDADSDDESDDDEETPVKKVDQGRKRPNTPASKTPVPYAKKAKNVTPEKSGGKKNAHTPTPHPAKKGGNPNSAGKFQSPKPGSQQQKKSGGKKGGR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121446g00004 285 MobiDBLite consensus disorder prediction 139 285 - -
Stsc121446g00004 285 MobiDBLite consensus disorder prediction 260 279 - -
Stsc121446g00004 285 Pfam Nucleoplasmin-like domain 3 96 IPR041232 -
Stsc121446g00004 285 MobiDBLite consensus disorder prediction 103 127 - -
Stsc121446g00004 285 Gene3D Nucleoplasmin core domain 1 103 - -
Stsc121446g00004 285 FunFam Histone deacetylase HDT1 1 102 - -
Stsc121446g00004 285 MobiDBLite consensus disorder prediction 164 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121446g00004 Stsc-Chr121446 10573 12811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121446g00004 1 97 C2H2 Transcription Factor Family AT3G44750 52.577 2.09e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121446g00004 - - gmx:547649 232.646