Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121443g00004 ATGAAATTGGAACCCAACACAACCACCCAAGTTGCTGTCCCTCTCCTCGATGACTCCCAAGAACATCCCCAACAACATCAACATGGGTCCATTTCCGGGGCAGTGTTCAACATCTCAACCACCATGATCGGTGCCGGAATCATGTCGGTTCCGGCAACCATGAAGGTTCTGGGCATACTTCCTGGCTTCTTTGTCATTGTTTTTGTGGCAATCATAACCGATGTTACGGTGGAGTTCATGTTAAGGTACACCGCACATGGAAAGTCTCTTACATATGCTGCCATGGTTGGTGAATCATTTGGCTCATTGGGCTCCCTTGCCCTCAAGATTTGTGTCATCATAACAAACCTTGGTGTTCTTATCATCTACTTCATTGTTCTCGGAGACGTACTATGTGGAAACGAATCCAAAGGAATCACACATTTGGGGATCCTTCAAGAATGGTTTGGGATCCACTGGTGGACCTCACGTGCTTTTGCTCTTCTTATAGTTGCTCTTTTCATAATGCTCCCACTTGTTATGTTACGTCGTGTTGATTCATTAAGATATAGTTCAGCAATATCAATCCTACTAGCATTGGTGTTTGTTGCAATATGCTCTTCCATGGCTTTTTATGCATTGTGGTGCGGCAAAACTCAGCCACTGAGGATTCTTCCTGATTTCTCTCAAGTCACTCTCCTTGATCTTTTCACCACTGTTCCTGTCTTTGTCACTGGTTTCGGATTCCATGTCAACGTTCATCCAATCAGAGCAGAGCTAGGAAAACCAGGGGACATGAATTTGGCAGTGAGGATTTCATTGATGATATGTGTAGCCATATATTTTGCAATTGGATTCTTTGGTTACCTATTATTTGGAGACTCAATCATGGCAGATATGTTAGTCAACTTTGACCAAAACTCCAACACAAGTGCTGGGAGATTCCTCAATGACATTGTTAGGTTAAGCTATGCACTCCACCTTGCCCTTGTTTTCCCCATCATGAATTATTCCTTGAGGGCTAACATTGATGAACTCATTGCATTCTTAAGTAATAAAAATAATGATAACAACAATAGGGTTCCTCTTGCATTAGACACACCAAGATTTGTGTCATTGACTCTTGGATTGGATATGCATGGCATATCAAGGACCAAAGATCAAGTGATGGCAATAGTGGTGATTGTTTTGGCTGTGGGGACTAGTGGAATTGCTATATGGTCCAACTTGTATGGTTGA 1218 0.4253 MKLEPNTTTQVAVPLLDDSQEHPQQHQHGSISGAVFNISTTMIGAGIMSVPATMKVLGILPGFFVIVFVAIITDVTVEFMLRYTAHGKSLTYAAMVGESFGSLGSLALKICVIITNLGVLIIYFIVLGDVLCGNESKGITHLGILQEWFGIHWWTSRAFALLIVALFIMLPLVMLRRVDSLRYSSAISILLALVFVAICSSMAFYALWCGKTQPLRILPDFSQVTLLDLFTTVPVFVTGFGFHVNVHPIRAELGKPGDMNLAVRISLMICVAIYFAIGFFGYLLFGDSIMADMLVNFDQNSNTSAGRFLNDIVRLSYALHLALVFPIMNYSLRANIDELIAFLSNKNNDNNNRVPLALDTPRFVSLTLGLDMHGISRTKDQVMAIVVIVLAVGTSGIAIWSNLYG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121443g00004 405 PANTHER AMINO ACID TRANSPORTER 20 391 - -
Stsc121443g00004 405 Pfam Transmembrane amino acid transporter protein 29 353 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121443g00004 Stsc-Chr121443 21723 24930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121443g00004 8 404 Amino Acid or Auxin Permease AAAP Family AT3G56200 45.434 1.89e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121443g00004 - - ahf:112765408 704.131