Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121443g00003 ATGTCTCCGACGGCCGGAGCACGCGTTCCACTCCTGCCAGCTGCGAAGCTGGTGGCGGAGGAGGTTCCTCCGGCGACGGTATCCGGTGCCGTGTTCAACGTGGCGACGAGCGTAATTGGAGCGGGAATTATGTCAGTTCCGGCGACGATTAAGGTTCTGGGAGTAGTTCCGGCGTTCTTGTTGATATTTGTAACGGCGATCCTGGCGGAGATATCGGTGGAGTTTCTGATGAGGTTCACGCATTCCGGTGAAACGACGACGTATGCGGGGGTGATGAGGGAGTCGTTTGGTCCGTTAGGAGCAGTTGCTGCACAAGTTGGTGTTATCATCACTAACCTTGGATGCTTAATCATGTACTTAATTATTATCGGTGACGTTGTATCTGGAAAGCAAGGAGAAGGAGAAGTACACTTGGGTATATTGCAGCAATGGTTTGGGATTGAGTGGTGGAATTCTCGTGAATTTGCACTCCTTATCATCTTGATCTTTGTTATGCTTCCCTTGGTCTTGTTCCGACGAGTAGAGTCGTTGAAATTCAGCTCTGCAATATCAACGTTTCTTGCTGTGGCATTTGTTGCAATATGTTCGGTTATGGCTATTGCTGCTCTCGTGCAAGGACGCACACAGACGCCCAGATTGTTTCCTCAGCTGGACCACAACACTTCTTTCTTTGACCTCTTCACTGCTGTTCCAGTCATTGTCACAGCCTACACTTTCCATTTCAATGTGCATCCAATTGGTTTTGAGCTTGAGAAGCCATCAGACATGACCAAAGCGGTTAGAATAGCATTGTTGCTCTGTGCTGGAATATACTATGCAATAGGGCTATTTGGGTACCTCTTGTTTGGTGATTCAACACAATCAGATATTCTCATAAACTTTGATCAGAATGCTAGTGGTTCTGCAGTTGGTTCATTGCTCAACACTTTGGTCCGTTTGAGCTATGCATTACATGTGATGCTGGTCTTCCCGTTGCTCAATTTCTCATTGAGAGCCAACATTGATGAGTTCCTCTTCCCCAAGAAGCCTCTTCTTTCCACAGACAACAAGAGATTTATCATCATTACTCTTGCATTGTTGGTGTCCAGCTATGTTTTTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTTGGATCAACATCTGCTGTCTGCCTTGCCTTCATCTTCCCTGCTTCAATTGTTTTGAGGGATGCTCCTGGTATAGCAACAAAAAAGGACAAAATAATAGCACTAGTTATGGTGGTAGTAGCTGTAGTAACAAGTGTGATTGCAATCACCACCAACGTGTTCAATTTTTTCGATAGCAGTTCATCATGA 1326 0.4548 MSPTAGARVPLLPAAKLVAEEVPPATVSGAVFNVATSVIGAGIMSVPATIKVLGVVPAFLLIFVTAILAEISVEFLMRFTHSGETTTYAGVMRESFGPLGAVAAQVGVIITNLGCLIMYLIIIGDVVSGKQGEGEVHLGILQQWFGIEWWNSREFALLIILIFVMLPLVLFRRVESLKFSSAISTFLAVAFVAICSVMAIAALVQGRTQTPRLFPQLDHNTSFFDLFTAVPVIVTAYTFHFNVHPIGFELEKPSDMTKAVRIALLLCAGIYYAIGLFGYLLFGDSTQSDILINFDQNASGSAVGSLLNTLVRLSYALHVMLVFPLLNFSLRANIDEFLFPKKPLLSTDNKRFIIITLALLVSSYVFAIAIPDIWYFFQFLGSTSAVCLAFIFPASIVLRDAPGIATKKDKIIALVMVVVAVVTSVIAITTNVFNFFDSSSS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121443g00003 441 Pfam Transmembrane amino acid transporter protein 25 427 IPR013057 -
Stsc121443g00003 441 PANTHER AMINO ACID TRANSPORTER 21 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121443g00003 Stsc-Chr121443 11161 13252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121443g00003 4 434 Amino Acid or Auxin Permease AAAP Family AT3G56200 60.557 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121443g00003 - - tpra:123881388 677.552