Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121442g00001 ATGGCAGGGGGAGACCCACAGCGGAACAAGAGACTCGTCCTTATAGGAGTCTCAACCTTTCTATTGGTGGCTATGGTGGTGGCCGTCACACTCAGCGTCACCCTTAACAAGACCAACACCGCCGATTCAAAGGCTGACGGCAAGAACCAGGTTGCATCATCCGTGAAAGCAGTGGAGAAACTGTGCGCTCCTACAGATTACCCAGAGGAATGCCGGGACTCATTGTCCTCAGAGGCAGGCAACACCACCGACCCAAGGGAACTCATCAAGATCGCATTCAACATCACTATCAAGAAGATAAGCGATGGCCTCGAGCAGACCCAGATGCTTCAGGATTTGGAGAAGGACCCCATGGCCAAACAGGCTCTTGACTCATGCAAGCAACTCATGGATCTCTCCATTGATGAGTTCAACAGGTCCCTCGAGAAGCTTGGAAGGTTCGACCTCAACAACATCGAAACCATTCTTGGCAACTTGAGGGTCTGGCTCAGCGGTGCCATTACCTACCAGGAAACATGCCTTGACGGCTTCCAAAACACCACCAGCGACGCAGGCGACCAGATGAAGGAATTCTTGCGGACCGCCATGCACATGAGCAGCAACGGCCTCGCCATCATCACCGACCTCCACCAGACCATGACCAACTTCCGTTTCTCATCCAGCAATAATGCGGCCGGAGCCCGCCGCCTGATGTCCGAGGAGGACGACAACGATCTCCCCGAGTGGATCGAGGACCGCGTCGGCGTCCGCAAGCTTATGGCTACCGTTGCTGGCGGAAGAAGATTCAAGGCTCACGTCACAGTTGCCAAGGATGGTTCTGGAGATTTCAAGACCATCACAGAGGCCTTGATGAAGGTTCCTCCTCAGAACAAGAAGCCTTTCATCATCCACATCAAGGAGGGTGTCTACCAGGAGTACGTCGAAGTCCCCAGGAACATGACCCACGTCGTCTTCATCGGCGATGGTGGTAACAAGTCCCGCATCACCGGTAACAAGAACTTCATCGATGGCGTTAACACTTACAAGACCGCCACCGTTGCTGTTCAAGGAGACTACTTCGTTGCCATGGGAGTCGGGTTCGAGAACTCAGCCGGAGCAGAGAAGCACCAGGCAGTGGCTCTGAGGGTTCAAGCAGACAAATCCATCTTCTTCAAGTGCAGATTTGACGGTTACCAAGACACACTCTACGCACACACCATGCGTCAGTTCTACAGGGACTGCGTCATCTCAGGCACCATAGACTTCATCTTCGGTGATGCAGTGTCTGTCTTCCAGAACTGCACCTTCGAGGTGAGGAAGCCATTGTCAAACCAACAGTGCATTGTGACAGCACAAGGCAGGAAGGAGAGGTACCAACCAACAGGAATAGTTATCCAGGGTGGTTCCTTCGTGGCAGACCCATTATACTACCCAGTCAGGTTCACCAACAAGGCCTACCTGGCTCGTCCATGGAAGAATTACTCAAGGACCGTCTTCATGGATGCCTTCATTGATGACTTGATCACACCCGAAGGTTACTTGCCATGGCAAACTCCCGAGGGACTCACCGGCATGGACACATGCTTCTACGCTGAGTTCAACAACCGTGGCCCCGGTGCCGACAAGAGCAAGCGTGTCAACTGGATAGGTGTGAAGAAAGACTTCACTCCAGAAGAAGCAAGTACGTATAGCCCATCCTCCTTCTTCCGTGGAGATGAGTGGATTAAGGTTACCAAGATTCCATACAACCCTGGCAAAGCCGCCCCAACTTCCAATGAACAGATTGCTGCCTCCATATTAGCGCGTTATGCATCTGCCCCTAAAAGCAGCAAAGCATCTGCTCCTACTTCTTCCGTAAATGTAGATGTTTCTGTCACTTCCAATGCTTCTTCTCCTCCAACTGCCGCCACCACGGCCATCTCTGATTCCTCCCCTGCTCCTTCCCCCCAAGCATAA 1935 0.5271 MAGGDPQRNKRLVLIGVSTFLLVAMVVAVTLSVTLNKTNTADSKADGKNQVASSVKAVEKLCAPTDYPEECRDSLSSEAGNTTDPRELIKIAFNITIKKISDGLEQTQMLQDLEKDPMAKQALDSCKQLMDLSIDEFNRSLEKLGRFDLNNIETILGNLRVWLSGAITYQETCLDGFQNTTSDAGDQMKEFLRTAMHMSSNGLAIITDLHQTMTNFRFSSSNNAAGARRLMSEEDDNDLPEWIEDRVGVRKLMATVAGGRRFKAHVTVAKDGSGDFKTITEALMKVPPQNKKPFIIHIKEGVYQEYVEVPRNMTHVVFIGDGGNKSRITGNKNFIDGVNTYKTATVAVQGDYFVAMGVGFENSAGAEKHQAVALRVQADKSIFFKCRFDGYQDTLYAHTMRQFYRDCVISGTIDFIFGDAVSVFQNCTFEVRKPLSNQQCIVTAQGRKERYQPTGIVIQGGSFVADPLYYPVRFTNKAYLARPWKNYSRTVFMDAFIDDLITPEGYLPWQTPEGLTGMDTCFYAEFNNRGPGADKSKRVNWIGVKKDFTPEEASTYSPSSFFRGDEWIKVTKIPYNPGKAAPTSNEQIAASILARYASAPKSSKASAPTSSVNVDVSVTSNASSPPTAATTAISDSSPAPSPQA 644
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc121442g00001 644 MobiDBLite consensus disorder prediction 602 644 - -
Stsc121442g00001 644 Pfam Pectinesterase 265 565 IPR000070 GO:0030599|GO:0042545
Stsc121442g00001 644 Pfam Plant invertase/pectin methylesterase inhibitor 57 205 IPR006501 GO:0004857
Stsc121442g00001 644 ProSitePatterns Pectinesterase signature 2. 409 418 IPR033131 -
Stsc121442g00001 644 SUPERFAMILY Pectin lyase-like 262 576 IPR011050 -
Stsc121442g00001 644 NCBIfam pectinesterase inhibitor domain 23 210 IPR006501 GO:0004857
Stsc121442g00001 644 CDD PMEI-like_3 61 210 - -
Stsc121442g00001 644 ProSitePatterns Pectinesterase signature 1. 290 309 IPR018040 -
Stsc121442g00001 644 PANTHER PECTINESTERASE 21 571 - -
Stsc121442g00001 644 SMART PMEI_2 53 205 IPR006501 GO:0004857
Stsc121442g00001 644 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Stsc121442g00001 644 Gene3D - 259 579 IPR012334 -
Stsc121442g00001 644 MobiDBLite consensus disorder prediction 601 644 - -
Stsc121442g00001 644 FunFam Pectinesterase 54 210 - -
Stsc121442g00001 644 FunFam Pectinesterase 259 579 - -
Stsc121442g00001 644 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 211 IPR035513 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc121442g00001 Stsc-Chr121442 1237 3383 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121442g00001 5 644 Carbohydrate Esterase AT3G05610 46.789 0.0 624