Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121425g00002 ATGGAGCGCTACGAGATTATCAAAGATATTGGTATGGGGAACTTTGCTGTGGCCAAATTGGTGAGAGACAATTTCACCAAAGAGCTTTTCGCTGTTAAGTTCATTGAGAGAGGCTACAAGATTGATGAGCATGTTCAGAGGGAGATCATGAATCACAGGTCCTTGAAGCATCCCAATATTGTTAGATTCAAAGAGGTGCTTTTGACTCCAACACATCTAGCTATAGTAATGGAGTATGCTGCTGGAGGAGAACTCTTTGAGAGGATATGCAATTATGGTAAATTTGGCGAGGATGAGGCGAGATTTTTCTTTCAGCAATTGATATCAGGAGTTAGCTATTGTCATTCTATGCAAATCTGTCATAGAGATCTGAAACTCGAAAACACACTTCTAGACGGAAGCACTGCACCGCGAGTCAAAATTTGTGACTTCGGTTATTCAAAGTCATCTGTGTTGCATTCACAACCAAAGTCTACCGTAGGAACTCCAGCTTACATCGCACCTGAGGTCCTGACAAGGAAAGAATATGATGGGAAGATTGCAGATGTTTGGTCTTGTGGAGTCACCTTATACGTGATGTTATTTGGGACTTATCCTTTTGAAGATCCAGCAGATCCTAGAAATTTCAAGAAAACTATTGGGAGGATACTCGGTGTCCAGTATGTAATTCCTGATTGTGAACGAGTTTCCTGGGAATGTAGACATCTTATATCACAAATCTTTGTGGCGAATCCTGAACAGGCTGTGGGATAA 753 0.4143 MERYEIIKDIGMGNFAVAKLVRDNFTKELFAVKFIERGYKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNYGKFGEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMLFGTYPFEDPADPRNFKKTIGRILGVQYVIPDCERVSWECRHLISQIFVANPEQAVG 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121425g00002 250 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Stsc121425g00002 250 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Stsc121425g00002 250 FunFam Serine/threonine-protein kinase SRK2A 80 250 - -
Stsc121425g00002 250 ProSiteProfiles Protein kinase domain profile. 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121425g00002 250 Pfam Protein kinase domain 4 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121425g00002 250 SUPERFAMILY Protein kinase-like (PK-like) 1 247 IPR011009 -
Stsc121425g00002 250 Gene3D Transferase(Phosphotransferase) domain 1 80 249 - -
Stsc121425g00002 250 FunFam Serine/threonine-protein kinase SAPK2 1 79 - -
Stsc121425g00002 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Stsc121425g00002 250 PANTHER SERINE/THREONINE KINASE 2 247 - -
Stsc121425g00002 250 SMART serkin_6 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121425g00002 Stsc-Chr121425 12891 15835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121425g00002 3 245 CBL-interacting serine-threonine protein kinases AT2G26980 42.126 6.72e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Stsc121425g00002 Pkinase 3.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121425g00002 K14498 - gmx:100798091 466.463