Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121424g00002 ATGAGTTCAAAGGTTTTTACTTTTGAGGATGTGGCAAACCACAATCACAAGAATGATTGCTGGCTTATAATCAATGGAAAGGTATATGATGTTACTCCATTTTTGGATGACCATCCAGGAGGTGACGAAGTTTTGCTGACAGCTACAGGAAGAGATGCTACCATTGATTTTGAAGATGTTGGCCACAGTGACTCTGCTGTAGAGATGATGCAAAAATACTTCGTCGGCGACGTAGATACCAACACACTTCCGGCAGAATCTAAACACAATCTGCCACCACCAACACTAGCACCTTCCACTAGCAACCAATCCTCGGCCGGATTCATCATTCAATTCTTCCAATACGTGCTGCCATTGCTGATACTGGGATTCGCATTCGCTCTGCAGTTCTTTGGCAAAAAAGACAAACCAGAAGAAAACTGA 423 0.4326 MSSKVFTFEDVANHNHKNDCWLIINGKVYDVTPFLDDHPGGDEVLLTATGRDATIDFEDVGHSDSAVEMMQKYFVGDVDTNTLPAESKHNLPPPTLAPSTSNQSSAGFIIQFFQYVLPLLILGFAFALQFFGKKDKPEEN 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121424g00002 140 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 3 79 IPR001199 -
Stsc121424g00002 140 PANTHER CYTOCHROME B5 2 133 - -
Stsc121424g00002 140 SMART Cyt_b5_2 6 79 IPR001199 -
Stsc121424g00002 140 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 86 IPR036400 -
Stsc121424g00002 140 Pfam Cytochrome b5-like Heme/Steroid binding domain 7 78 IPR001199 -
Stsc121424g00002 140 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 34 41 IPR018506 GO:0020037
Stsc121424g00002 140 PRINTS Cytochrome B5 signature 28 38 IPR001199 -
Stsc121424g00002 140 PRINTS Cytochrome B5 signature 66 78 IPR001199 -
Stsc121424g00002 140 PRINTS Cytochrome B5 signature 38 52 IPR001199 -
Stsc121424g00002 140 PRINTS Cytochrome B5 signature 53 60 IPR001199 -
Stsc121424g00002 140 FunFam Cytochrome b5 type B 1 83 - -
Stsc121424g00002 140 Gene3D - 1 84 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121424g00002 Stsc-Chr121424 25761 28994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121424g00002 1 135 NADPH P450 reductases AT5G53560 54.745 1.28e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121424g00002 K23490 - gmx:100788796 206.453