Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121407g00004 ATGATGGACTCATCTTTAAAGAAGCAACTATTCTCCCTCCTCTCTCTTCTCTTAATTCTACTTCTCTCAGGACAAAGGGAAAGGGTGCAAGCAGAGGCTGTCCAACCCACAAAGAAACTGTTCGTTTTTGGAGACTCATATGCTGACACCGGCAACATCAGAAAAAGCCTCTCCAATTCATGGAAAGACCCCTACGGCATCACCTTTCCCGGCAAGCCCGCCGGGAGATTCTCCGATGGAAGGGTCCTCACCGACTACATTGCTAAGTATCTAGGAGTGAAAACACCAGTCCCATACAGAGTGAGGAAGCTAATGCCGAAGCAGGTAAAATACGGCATGAACTTTGCAGTGGGTGGAACTGGCGTATTTGACACTTCTACTCCGGGCCCTAACATGACCACACAGATCCAATTGTTCCAGCAACTCATCCATGACGGAATCTACACCGCTTCTGATCTCACCAACTCCGTCGCTCTCGTCTCTGTTGCTGGTAACGACTATAGTCACCACCTCGCCACTCACGCCTCTCCTCAGGGTCTACCACTTTTCGTGGCGTCAGTGGTGAATCAAACATCAATGAATCTGATGCGAATCAAAGAATTGGGAGTAAAGAAGATCATAGTGGGCGGCCTCCAACCCCTTGGATGCCTCCCTCAGGTGACAGCCTTATCATCCTTCCAACAATGCAACGCCTCCTCCAACACCTTGGTGGCTCTCCACAACAACCTCTTGAACCAAGCAGTTACCAAACTAAACCAGTCGTGGTCCTCCTCCTTCGCCGTTCTCGACCTCTACAACAGCTTCATGTCCGTTCTAAACCACCCTACAACGCACAACATCCAGAACCAGTTGCGGCCGTGCTGCGTCGGCGTAAACAGAAACTATTCGTGTGGGAGTGTGGATCAGAACAACGTGAAGATGTATAGGGTTTGTGATGATCCAAAATCAGCCTTCTTTTGGGATCTGGTGCACCCAACACAGGCAGGGTGGCATGCCGTGTATAACAAGTTAAGAACCATGAATGCTCTTGAAGCAATTCAGTTCTAG 1047 0.4938 MMDSSLKKQLFSLLSLLLILLLSGQRERVQAEAVQPTKKLFVFGDSYADTGNIRKSLSNSWKDPYGITFPGKPAGRFSDGRVLTDYIAKYLGVKTPVPYRVRKLMPKQVKYGMNFAVGGTGVFDTSTPGPNMTTQIQLFQQLIHDGIYTASDLTNSVALVSVAGNDYSHHLATHASPQGLPLFVASVVNQTSMNLMRIKELGVKKIIVGGLQPLGCLPQVTALSSFQQCNASSNTLVALHNNLLNQAVTKLNQSWSSSFAVLDLYNSFMSVLNHPTTHNIQNQLRPCCVGVNRNYSCGSVDQNNVKMYRVCDDPKSAFFWDLVHPTQAGWHAVYNKLRTMNALEAIQF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121407g00004 348 SUPERFAMILY SGNH hydrolase 36 337 - -
Stsc121407g00004 348 Gene3D SGNH hydrolase 25 345 IPR036514 -
Stsc121407g00004 348 CDD SGNH_plant_lipase_like 40 337 IPR035669 -
Stsc121407g00004 348 PANTHER OSJNBB0059K02.9 PROTEIN 18 339 - -
Stsc121407g00004 348 Pfam GDSL-like Lipase/Acylhydrolase 40 336 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121407g00004 Stsc-Chr121407 19402 23025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121407g00004 13 333 Pollen Coat Proteome AT1G75930 27.035 1.81e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121407g00004 - - gmx:100788092 504.982