Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121382g00004 ATGTCGCCGGCGGCGGGTGTCAACGTTCCCCTCCTGCCAGAATCCACCGCGTCCTCAACTAAGCCGGCGTCGGTCTCTGGCGCCGTCTTCAACGTAGCGACGAGCGTCGTCGGCGCGGGAATCATGTCGATCCCGGCGATCCTAAAGGTCCTCGGCGTTATACCTGCTTTCGCCATGATTGCAGTGGTCGCAGTTCTGGCCGAAGTGTCAGTTGAGTTTCTGATGAGGTTCACGAACTCCGGCAAAACGACGACGTACGCCGGCGTCATGGGAGAAGCGTTCGGCACCTTCGGAGCACTTGCCGTACAAGTTTGTGTCATCGTCACAAACCTTGGAGCCTTGATTCTATACCTTATTATTATTGGGGATGTGCTCTCTGGAAAGGGAAATGAAGGTGGAGAAGTGCACTTAGGTCTTCTGCAGCAGTGGTTTGGGATTCATTGGTGGAATTCCAGGGAATTTGCTTTGTTCATAACCTTGGTCTTTGTTATGCTTCCATTAGTCTTGTACAAACGTGTAGAATCCTTGAAGTACAGTTCAGCAGTGTCAACTTTTCTAGCAGTGGTGTTTGTGGCCATATGTTCTGGGATGGCAATTCTTGCAGTCTTGCAAGGAAAAGCACAAACCCCAAGATTGTTTCCTCGCTTAGATTACCAAACATCCTTCTTTGATCTCTTCACGGCAGTTCCAGTTGTAGTTACAGCCTTCACATTTCATTTCAACGTGCATCCAATTGGGTTTGAGCTTGCCAAGGCATCCGACATGGCCAAAGCGGTTCGATTAGCCTTGATGCTCTGTGCTGTCATATACTTCGCAATTGGCCTATTCGGTTACCTCTTGTTTGGTGATAAAACGCAATCGGACATTCTGATCAATTTCGATCAAAATGCTGGTTCTGCTGTTGGTTCCTTGCTCAATGGTGTTGTCCGTGTAAGCTATGCTTTACACATTATGCTGGTTTTTCCTCTGTTGAACTTCTCTCTGAGAGCCAACATAGATGAACTCCTCTTCCCCAAGAAGCCTATGCTTGCTAATGACAACAAAAGATTTGTGATCCTCACTCTGGTGCTTCTAGTCTTCAGCTACCTTGCTGCCATAGCTATTCCGGATATTTGGTACTTCTTTCAGTTTCTGGGATCAACAACTGCCTTGTGCCTTGCCTTTGTTTTCCCAGGAGCTATTGTTTTAAGGGATGCTTATGAGGTATCTACAAGAAGGGACAAAATCATAGCACTAGTTATGATTATGCTATCTGTGGTGACTAGTGTGATAGCCATTTCAACTAATGTTTATAATGCTTTTAGTACCAAGTCATGA 1317 0.4655 MSPAAGVNVPLLPESTASSTKPASVSGAVFNVATSVVGAGIMSIPAILKVLGVIPAFAMIAVVAVLAEVSVEFLMRFTNSGKTTTYAGVMGEAFGTFGALAVQVCVIVTNLGALILYLIIIGDVLSGKGNEGGEVHLGLLQQWFGIHWWNSREFALFITLVFVMLPLVLYKRVESLKYSSAVSTFLAVVFVAICSGMAILAVLQGKAQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASDMAKAVRLALMLCAVIYFAIGLFGYLLFGDKTQSDILINFDQNAGSAVGSLLNGVVRVSYALHIMLVFPLLNFSLRANIDELLFPKKPMLANDNKRFVILTLVLLVFSYLAAIAIPDIWYFFQFLGSTTALCLAFVFPGAIVLRDAYEVSTRRDKIIALVMIMLSVVTSVIAISTNVYNAFSTKS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121382g00004 438 PANTHER AMINO ACID TRANSPORTER 14 421 - -
Stsc121382g00004 438 Pfam Transmembrane amino acid transporter protein 22 426 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121382g00004 Stsc-Chr121382 8726 11306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121382g00004 1 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.447 5.96e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121382g00004 - - gmx:100815694 704.901