Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121379g00007 ATGCCGGCCTGGTGGAGTAGAAAATCCTGCAAGAACAAACAGCACAAGCAGGGCGACGCTGAAGACGATGAAGACACACGTGGCAGGCACAAACTCAATCTCATGGGATCGCCGATTAGCATTATCAGCAGCAGGAAGAAAGGCAAGGACAAGGAAAAGAACAACAACAACAACAACAAGAGCTTCGACGAGCTCTTCGTCTCTCGCAAGGAATTCTCCAGCGTCGACGGTAACAGCAGCAGCAGAGACCCAGACCAAGGGCTTCCGTTGCCTCGCCCTTCCGTTTCGGCCAATCACAGCTTCAGTAACGATCAGGGCCTCGTCTTTGGATCTGCTTCTCTATCTGGTTCCAGCCTCAGCTCCTCCACTTCTTGCGATGAAAACCCTATATCTCCTCAATTCCTCAACAACAGAGGACAAGGTGACATCAAATTCCATGGGAGGCCAAAGAGCCCAGGTACTGGGTCAAGGGGACCAACGAGCCCTACATCGCCACTTCATCAGAGAATTTTGAGTCTTGACTCTCCTACAGGCAAGCAAGAGGATGGAAAAAGCGAATGTCATCCGTTGCCTCTTCCCCCCGGCTCTCCTACTAGTCCTTCCACCCTTTCCACCCCGCGTGCAAGCGGGTCCTTTGAAAACATTGCCAATAATCTATCCAAGTGGAAGAAAGGAAAGCTTCTAGGAAGGGGAACTTTCGGGCATGTTTATCTTGGATTCAATAGTGAGAGTGGACAAATGTGTGCAATAAAAGAAGTAAGGGTTGTCTCTGATGATCCAACATCAAAAGAGTGCCTCAGACAACTTAACCAGGAGATAAACTTGCTTCACCAGCTTTCACATCCAAATATTGTTCAATACTATGGGAGTGAACTGGGTGAAGAAACACTTTCAGTTTATTTGGAATATGTCTCTGGTGGTTCTATCCATAAATTGCTTCAGGAATATGGTTCATTTAAGGAGCCCGTCATTCAAAATTATACCCGGCAGATTGTATCTGGACTTGCATATTTGCATGCGAGAAATACAGTACACAGGGATATCAAAGGAGCTAACATACTTGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACTTATAAATTCTGCTGCCTCAGTACTTTCATTCAAGGGAAGTCCATACTGGATGGCACCCGAGGTTGTAATGAATACCAATGGCTATGGTCTTCCGGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCGAAGCCTCCATGGAGTCAATACGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGACATCCCTGAGCATCTTTCAGATGATGCCAAAAGCTTCATTAAGCTATGTTTAAATAGGGATCCATTAGCACGCCCAACAGCTCAAATGCTACTAGACCACNNNNNNNNNNGCTGTAAATGTCAGCATAACAAGAGATGCTTTCCCCCGCATGTTAGATGGAAGCCGGACGCCGCCTGTTTTGGAGCATCAATCCAATAG 1524 0.46 MPAWWSRKSCKNKQHKQGDAEDDEDTRGRHKLNLMGSPISIISSRKKGKDKEKNNNNNNKSFDELFVSRKEFSSVDGNSSSRDPDQGLPLPRPSVSANHSFSNDQGLVFGSASLSGSSLSSSTSCDENPISPQFLNNRGQGDIKFHGRPKSPGTGSRGPTSPTSPLHQRILSLDSPTGKQEDGKSECHPLPLPPGSPTSPSTLSTPRASGSFENIANNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDPTSKECLRQLNQEINLLHQLSHPNIVQYYGSELGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKLINSAASVLSFKGSPYWMAPEVVMNTNGYGLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPDIPEHLSDDAKSFIKLCLNRDPLARPTAQMLLDHXXXXCKCQHNKRCFPPHVRWKPDAACFGASIQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121379g00007 507 MobiDBLite consensus disorder prediction 93 138 - -
Stsc121379g00007 507 ProSitePatterns Protein kinases ATP-binding region signature. 228 251 IPR017441 GO:0005524
Stsc121379g00007 507 MobiDBLite consensus disorder prediction 44 70 - -
Stsc121379g00007 507 Gene3D Transferase(Phosphotransferase) domain 1 219 491 - -
Stsc121379g00007 507 FunFam Mitogen-activated protein kinase kinase kinase 220 494 - -
Stsc121379g00007 507 SUPERFAMILY Protein kinase-like (PK-like) 199 482 IPR011009 -
Stsc121379g00007 507 MobiDBLite consensus disorder prediction 12 31 - -
Stsc121379g00007 507 MobiDBLite consensus disorder prediction 154 175 - -
Stsc121379g00007 507 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 30 476 - -
Stsc121379g00007 507 MobiDBLite consensus disorder prediction 1 210 - -
Stsc121379g00007 507 SMART serkin_6 222 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121379g00007 507 CDD STKc_MEKK1_plant 221 475 - -
Stsc121379g00007 507 ProSiteProfiles Protein kinase domain profile. 222 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121379g00007 507 Pfam Protein kinase domain 223 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121379g00007 Stsc-Chr121379 20413 25133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121379g00007 1 475 MAP Kinase Kinase Kinase AT1G53570 59.754 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Stsc121379g00007 Pkinase 3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121379g00007 K04421 - qsa:O6P43_030333 612.453