Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121379g00003 ATGATTTCATCATCATCAGGTAATGAAATTACTCAAATTAGAGCACAAAAGAAGAAACTTCTGATTCCAATAGCAATGGGAATAGTAGTGAAACTATTGGAGCTAGAGAGTGGTAGAGAGACATTGGTGAATCACCCAAATGGAGTTGATACATTGGTGAAGATGGTGTTCAGTGTAAAATGTGATCAAGATTGCAGTGACAGTGCTGTTGAGGCACTTTCCCTGGTTTGCTGTGATTATATGCATGCAAGAGAACAAGCCATTGGTGCCGGGGTTATTACAAAGTTGCTGTTGCTTATGCAGAGTCATTGTGCCACTACTACTAAATCAAAGGCCAGAATGCTCCTCAAATTGTTCAAATCCAAGTGGATTCAGGTGTCAAAGTAG 387 0.4005 MISSSSGNEITQIRAQKKKLLIPIAMGIVVKLLELESGRETLVNHPNGVDTLVKMVFSVKCDQDCSDSAVEALSLVCCDYMHAREQAIGAGVITKLLLLMQSHCATTTKSKARMLLKLFKSKWIQVSK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121379g00003 128 Gene3D - 10 122 IPR011989 -
Stsc121379g00003 128 PANTHER WDSAM1 PROTEIN 22 124 IPR045185 GO:0061630
Stsc121379g00003 128 SUPERFAMILY ARM repeat 25 118 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121379g00003 Stsc-Chr121379 11688 12320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121379g00003 24 123 U-box Gene Family AT2G35930 32.353 3.18e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121379g00003 - - adu:107479288 222.246