Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121379g00002 ATGGAAGGAGATCCATTAAAGAAGCAAAGGGAAGACATAGTGTGCTATGCACCACAGATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTTTGAACTATGCATTGCCTCTCTTCATATTGCAAGTTATGTTAGTTGTCATTGTTACACGCATCTTTGTCTTCATCCTCAAGCCCATTCGTCAGCCTCGTGTTATTGCTGAAATCTTGGGAGGAGTAATATTGGGTCCTTCGGTGCTTGGACAAAGCAAAACATTTGCAGAGGCAGTTTTTCCTCTGAGAAGTGTTATGGTCATTGAAACAATGGCAAACGTTGGTCTGCTCTACTTCCTGTTCTTGGTTGGATTGGGAATGGACGCTTCATCGGTGCTGCGCATTGGTAAAAAAACAGTTTTCATAGCAGCTGCAGGCATGGTGTTCCCCTTTGTCATTGGAGCAGTCTTCTCGTTTCTTATCAGAAGCAATGACAGTCCGGTTAACAAAGGTGCTTACATCTTGTTCCTCGGCGTTGTTCTCTCTGTAACTGCATTCCCTGTTCTTGCTAGAATCCTTGCCGAGCTTAAACTCATCAACACTGAGGTGGGAAGGGTTGCACTTTCCTCTGCACTCATCAATGATGCCTTTTCTTGGATACTTTTGGCCGTGGCCATCACTATGGCACAGAATGAAAAGCTTGTTTTGTCTTCCTTCATGATTCTGATTTCCAGTGTGGCCTTTGTGCTCTTTTATGTGTTTGTGGTGCGGCCGATCATCTTGTGGATTATAAGGAGGACGCCGGAGGGTGAATCGTTCAGCGATTTCTATGTTTGTCTAATACTAGCTGGTGTCATGGTTTCAGGTTTCATAACTGATGCTATGGGGACACATTCTGTTTTTGGAGCATTTGTTTTTGGATTGACAATCCCAAATGGACCACTTAGTTTAACTCTTGTGGAGAAAATTGAGGACTTCGTCTCAGGGCTTTTGCTTCCCTTATTCTTTGCAATTAGTGGGTTGAAGACTAATTTAAGTCTCATCAAAGGTGTACTCACATGGTTAGCCATAGTCCTCCTTGTTTTTCTATCTTGCATTGGCAAAATTGCTGGAACCATAATTGTTGCAGTTTCTTATCAAATGCCACTTAATGAAGGAGCGGCTCTAGGCTTACTCATGAACTCTAAAGGCCTTGTTGAGATGATTGTGCTTAATGTTGGCAGGGACCAAAAGGTTTTGGATGAGAGATCATTTGCAATAATGGTTACCATAACTGTGCTAATGACTGGAATAATTGTACCTGGATTATCAGCTATCTACAAGCCATCAAAGAGGGTCATGTCATACAAACGAAGAACAATTCAGATGTCAAAAAAAGATGAAGAGTTGAAGGTCCTAGTGTGTATCCATACACCTCGGAACGTGCCATCCATAATTAACCTTCTTGATGCCTCAAATCCAACAAATAATTCACCAATATGCATCTATGTCCTCCATTTGATAGAACTTAATGGCCGCACATCTGCATTGCTCATTGTCCACAACTCTACAAAATTGGATCAGCCTGCACTTAACGCAACTCACGCTCAATCTGATCACATAATCAATGCCTTTGCCAACTACGCGCAACAGGCTCCTTGTGTCTCTGTGCAGCCTTTGACAGCAATGTCCCCTTACTCCACAATGCATGAAGACATCTGCAATTTGGCTGAGGACAAGCGCGTCGCCTTCATAATCCTCCCATTCCACAAACAACATACTATTGATGGTGGAATGGAAGCAACAAACGCGCCATTTCGCGCTGTAAACCGGAATGTCCTTGCAAATGCACCTTGCTCAGTTGGAATTTTAGTAGATAGAGGCTTGAATTGGTCCAACCACTTGGTAGAGGATGAAGTATTGTCTCGTTACGTGTTAGTGTTGTTCTTTGGAGGCCCAGATGACAGAGAAGGATTGAGCTACGGATGGAGGATGTTGGAACATGAAGGTGTAAACCTTACTCTAATGCGCTTTGTTCCTGGAGCAGAAGTTGGAAGCACAATGAACACAAAGCACCCTACCCTCAACAACAATATAAACAATATTCAAGATGAACCGAGGATACTAACGGTAGAAACTGAAAAGGACTCAGAAAAGCAACTGGATGAGAAGCTTATACAGTTGTTCAGAATGAGTCATTTGAACAATAAATCCATTGTGTACATTGAGAAAGTAGTGAACAATGGCGAAGAGACCGTGGCCACTATAAGATCAATGGAGGACACCCATGACCTTATCATAGTTGGGAGAGGACAAGGAACGGTATCACCACTGACAGCAGGACTCACTGACTGGAGTGAGTGCCCTGAGTTAGGAGCTATTGGGGATTTGTTAGCATCACCAGATTTTGCAACATCTGCTTCAGTGTTGGTAGTTCAACAATATATTGGGCAAGGTTCAGAGGTAGATAATGGGTTGGCAACACCAGATAATGTAGTTAATACAAATGAAGAATATATTAATCAGATAACAGCACATCATTCAATAACACCACCAACTGGACATACTGTTCATATGTTCAATGACACAGAAAGACAATCTAGATGA 2562 0.4247 MEGDPLKKQREDIVCYAPQMITTNGIWQGDNPLNYALPLFILQVMLVVIVTRIFVFILKPIRQPRVIAEILGGVILGPSVLGQSKTFAEAVFPLRSVMVIETMANVGLLYFLFLVGLGMDASSVLRIGKKTVFIAAAGMVFPFVIGAVFSFLIRSNDSPVNKGAYILFLGVVLSVTAFPVLARILAELKLINTEVGRVALSSALINDAFSWILLAVAITMAQNEKLVLSSFMILISSVAFVLFYVFVVRPIILWIIRRTPEGESFSDFYVCLILAGVMVSGFITDAMGTHSVFGAFVFGLTIPNGPLSLTLVEKIEDFVSGLLLPLFFAISGLKTNLSLIKGVLTWLAIVLLVFLSCIGKIAGTIIVAVSYQMPLNEGAALGLLMNSKGLVEMIVLNVGRDQKVLDERSFAIMVTITVLMTGIIVPGLSAIYKPSKRVMSYKRRTIQMSKKDEELKVLVCIHTPRNVPSIINLLDASNPTNNSPICIYVLHLIELNGRTSALLIVHNSTKLDQPALNATHAQSDHIINAFANYAQQAPCVSVQPLTAMSPYSTMHEDICNLAEDKRVAFIILPFHKQHTIDGGMEATNAPFRAVNRNVLANAPCSVGILVDRGLNWSNHLVEDEVLSRYVLVLFFGGPDDREGLSYGWRMLEHEGVNLTLMRFVPGAEVGSTMNTKHPTLNNNINNIQDEPRILTVETEKDSEKQLDEKLIQLFRMSHLNNKSIVYIEKVVNNGEETVATIRSMEDTHDLIIVGRGQGTVSPLTAGLTDWSECPELGAIGDLLASPDFATSASVLVVQQYIGQGSEVDNGLATPDNVVNTNEEYINQITAHHSITPPTGHTVHMFNDTERQSR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121379g00002 853 Gene3D - 39 440 IPR038770 -
Stsc121379g00002 853 PANTHER CATION/H + ANTIPORTER 14 801 - -
Stsc121379g00002 853 MobiDBLite consensus disorder prediction 833 853 - -
Stsc121379g00002 853 Gene3D - 480 768 - -
Stsc121379g00002 853 FunFam Cation/H(+) antiporter 15 39 439 - -
Stsc121379g00002 853 Pfam Sodium/hydrogen exchanger family 46 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121379g00002 Stsc-Chr121379 4136 7043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121379g00002 13 826 Antiporter Super Family AT2G13620 64.251 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121379g00002 K26731 - fve:101314706 1136.32