Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121375g00006 ATGCCAGAGGAAACGACGTCGATCGACTATGTTATGGAGGCAGCGTCGGGGCCACACTTCTCCGGTCTCCGCCTCGACGGTCTCCTATCCTCCCCGCCGTCCTCCAACACGTCCTCCCCCGCCCACCGCTTCTCCTCCGCACCCGATCTTTCCTCCGCCCTCTCCCCTGATTCCCTCAACCAGCCCTTCGTTATTGGTGTTTCCGGTGGTACTGCTTCAGGGAAGACCACTGTCTGTGATATGATCATTCAGCAGCTCCACGACCACCGCGTTGTTCTTGTCAATCAGGATTCATTTTACCGTGGTTTGAGACCTGAAGAGTTGGAACGAGTTTCGGAGTACAATTTTGATCATCCAGATGCCTTTGACACTGAACAGCTATTAGAGTGCATGGGAAAGCTTATTGCTGGCCAGAGTGTGCAGGTGCCAATTTATGACTTTAAGAAGCACCAACGGTGTTCGGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAGGATGTCCGGGATTTAATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGACTAGCTCGTAGGATTAGACGTGACACAGTGGAGAGAGGCAGGGACATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTTAAGCCTGCCTTTGACGATTTTGTTCTACCATCAAAGAAGTATGCTGATGTAATCATTCCTCGGGGAGGTGATAATCATGTCGCAATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTTTGCAAAATATACCCAAATGTTTATGTTATTCAATCCACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGATTTTGTATTTTATTCTGATCGGCTTATTCGTCTGGTTGTTGAGCATGGTCTTGGTCATCTCCCATTTACCGAAAAGCAAGTCGTTACTCCAACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAGAAACTATGTGGTGTTTCAATTGTTCGAAGTGATCATTCAGTCCTTATTCTAAAACTAGAATTATTCACCACGGGCATTAAAATAGGAAAAATTCTGATTCATCGGGATGGAGACAATGGGAAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTTGATCCTGTCCTTGCTACAGGTAACTCTGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTCCCAGAGTCCCACATTATATTCCTCAATCTCATTTCTGCACCTGAGGGGATCCATTGTGTGTGTAAACGGTTTCCCTCGTTGAAAATTGTTACATCTGAGATTGATGTTGCTTTAAACGATGAGTTTCGGGTTATCCCTGGATTGGGCGAGTTTGGTGATCGCTACTTTGGTACAGATGATTGA 1455 0.446 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSNTSSPAHRFSSAPDLSSALSPDSLNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLRPEELERVSEYNFDHPDAFDTEQLLECMGKLIAGQSVQVPIYDFKKHQRCSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSDHSVLILKLELFTTGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNDEFRVIPGLGEFGDRYFGTDD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121375g00006 484 MobiDBLite consensus disorder prediction 28 51 - -
Stsc121375g00006 484 Pfam Phosphoribulokinase / Uridine kinase family 64 250 IPR006083 GO:0005524|GO:0016301
Stsc121375g00006 484 CDD UMPK 64 262 IPR000764 -
Stsc121375g00006 484 PANTHER URIDINE KINASE 42 393 - -
Stsc121375g00006 484 Gene3D - 266 482 IPR029057 -
Stsc121375g00006 484 FunFam Uridine kinase 59 265 - -
Stsc121375g00006 484 CDD PRTases_typeI 367 455 IPR000836 -
Stsc121375g00006 484 Gene3D - 58 265 IPR027417 -
Stsc121375g00006 484 Pfam Uracil phosphoribosyltransferase 280 482 - -
Stsc121375g00006 484 NCBIfam uridine kinase 62 262 IPR000764 -
Stsc121375g00006 484 MobiDBLite consensus disorder prediction 24 51 - -
Stsc121375g00006 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 255 IPR027417 -
Stsc121375g00006 484 SUPERFAMILY PRTase-like 265 483 IPR029057 -
Stsc121375g00006 484 FunFam Uridine kinase 266 482 - -
Stsc121375g00006 484 PRINTS Uridine kinase signature 208 219 - -
Stsc121375g00006 484 PRINTS Uridine kinase signature 62 79 - -
Stsc121375g00006 484 PRINTS Uridine kinase signature 194 204 - -
Stsc121375g00006 484 PRINTS Uridine kinase signature 230 243 - -
Stsc121375g00006 484 PRINTS Uridine kinase signature 92 103 - -
Stsc121375g00006 484 PRINTS Uridine kinase signature 137 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121375g00006 Stsc-Chr121375 22888 29899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121375g00006 1 484 PRT Gene Family AT5G40870 84.091 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121375g00006 K00876 - cave:132181173 849.351