Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121362g00002 ATGAAAATGGGAAGAAGCCATAGTTACTTGAAGGTTTGGATTCTTTGCCTTGCAGCATTAATTGGAGCAACAAGTGCTGATTTAGAACTTGGTTTCTATGCCAAAAGTTGCCCAAAGGCAGAGCAAATCATTTTCAATTATATTAATGAGCATATCACTAAGGTTCCTTCAATGGCTGCAGCACTCTTAAGGCTTCACTTCCATGACTGTTTTGTTAAGGGATGTGACGGGTCGGTGCTCGTGGCGTCAACAAAGAACAACCAAGCTGAAAAGGAAGCACCACCAAACCTAACTCTGAGAGGGTTTGACGTCATTGAAGAGATAAAAAGCATTCTTGAAAAAGAATGTCCTGGAGTTGTTTCTTGTGCAGATATAGTTGCTTTGGCCGCTAGAGACTCCGTTGGTGTCATTAGAGGGCCGCATTGGAATGTTCCGACAGGTAGAAGAGATGGGTTGGTGTCATCCGCAGCCTTAACCTTACAATTACTTCCGGCTCCATTTCAAGACCTCAACACTCTCATTGCACACTTTCGCCGAGTTGGACTTGATGTCAATGATCTTGTCATTCTCTCCGGTGCTCACACCATAGGAGTTGGCCATTGCTCAACCATCGCAACCCGGATATACAACTTCACCGGAAAGGGCGACGCCGACCCATCTATGGACAGTAACTACGTCCAAAACCTCAAAACCAAGAAGTGTAAGAGCATTGGAGACCAAACCACACTCATTGAAATGGACCCCGGAAGCCGCGACTCCTTTGATCTCGGCTACTACAAGCAGGTTCTGAAGAGGAGGGGTTTGTTCCAATCTGATTCTGCTTTGTTGAATAGTGTTGCCACTAGGAACATCATCAACCATGAGCTTTCCTCTATTGAGACTTTCTATAGGGAGTTTGGTATTTCTATGGAGAAGATGGGAAGGATTGGTGTCCTTACCGGCAAACAAGGAGAGATCAGAAAGATATGTTCAAAAATCAATTAA 984 0.4451 MKMGRSHSYLKVWILCLAALIGATSADLELGFYAKSCPKAEQIIFNYINEHITKVPSMAAALLRLHFHDCFVKGCDGSVLVASTKNNQAEKEAPPNLTLRGFDVIEEIKSILEKECPGVVSCADIVALAARDSVGVIRGPHWNVPTGRRDGLVSSAALTLQLLPAPFQDLNTLIAHFRRVGLDVNDLVILSGAHTIGVGHCSTIATRIYNFTGKGDADPSMDSNYVQNLKTKKCKSIGDQTTLIEMDPGSRDSFDLGYYKQVLKRRGLFQSDSALLNSVATRNIINHELSSIETFYREFGISMEKMGRIGVLTGKQGEIRKICSKIN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121362g00002 327 FunFam Peroxidase 164 306 - -
Stsc121362g00002 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 Gene3D - 31 327 - -
Stsc121362g00002 327 FunFam Peroxidase 31 169 - -
Stsc121362g00002 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Stsc121362g00002 327 PANTHER PEROXIDASE 25-RELATED 18 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 SUPERFAMILY Heme-dependent peroxidases 28 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 Pfam Peroxidase 49 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121362g00002 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Stsc121362g00002 327 CDD secretory_peroxidase 28 326 IPR033905 GO:0004601|GO:0042744
Stsc121362g00002 327 Gene3D Peroxidase, domain 2 164 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121362g00002 Stsc-Chr121362 12173 14671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121362g00002 12 327 Peroxidase AT4G11290 56.604 4.18e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121362g00002 K00430 - gmx:100785662 454.521