Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121361g00008 ATGGGTTACAAGGTTGGAATGACCCACATTGTTAGAGAAATTAAGAAGCCTGGATCAAAGCTTCATAAAAAGGAGACATGTGAGGCTGTTACCATCATTGAGACCCCTCCATTGCATTTAAGTGAGGAAGTCAAGAAGCGATTTTACAAGAATTGGTGCAAATCCAAAAAGAAGGCATTTACCAAGTATTCAAAAAAATATGAATCTGAGGAGGGGAAGAAAGATATTGAATCCCAACTTGAGAAATTGAAAAAATATGCAACTGTCATTCGCATTTTGGCTCATACCCAGATAAGGAAGATGAAGGGTCTAAAGCAGAAGAAGGCACATTTGATGGAGATCCAAGTCAATGGTGGGACTATTGCGTAG 369 0.3902 MGYKVGMTHIVREIKKPGSKLHKKETCEAVTIIETPPLHLSEEVKKRFYKNWCKSKKKAFTKYSKKYESEEGKKDIESQLEKLKKYATVIRILAHTQIRKMKGLKQKKAHLMEIQVNGGTIA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121361g00008 122 Gene3D - 14 122 - -
Stsc121361g00008 122 Pfam Ribosomal protein L3 39 122 IPR000597 GO:0003735|GO:0005840|GO:0006412
Stsc121361g00008 122 SUPERFAMILY Translation proteins 1 121 IPR009000 -
Stsc121361g00008 122 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 2 37 IPR045077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121361g00008 Stsc-Chr121361 32320 33501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121361g00008 1 122 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 69.863 8.60e-67 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121361g00008 K02925 - gmx:100782902 203.371