Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121361g00007 ATGATAGACATCATTGGTGTGACCAAGGGTAAAGGTTATGAAGGTGTTGTAACTAGATGGGGTGTCACTCGTCTTCCACGCAAGACGCACAGGGGTCTAAGGAAGGTTGCTTGTATTGGTGCTTGGCACCCTACCCGTGTTTCTTTCACAGTTGCTAGAGCTGGGCAGAATGGATATCATCACCGAACTGAGTTTAATAAAAAAATCTACAAGCTTGGGAAGTCAGGTCAAGAATCACATACTGCAATCACTGAATTTGACAGGACGGAGAAGGAGATTACACCGATGGGTGGATTTCCTCACTATGGTGTGGTAAAGGATGATTATTTTATGGTCAGGGGATGCTGTGTTGGACCTAAAAAGCGAGTTCTGACTCTTCGTCAGTCACTATTGAAGCAGACTTCTCGTGTGGCTCTTGAGGACATCAAGCTTAAGTTCATAGACACCTCTTCCAAGTTTGGACATGGTCGTTTCCAGACCACTCAAGAGAAGCAGAAGTTTTTCGGTCGCTTGAAGGCCTGA 522 0.454 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPTRVSFTVARAGQNGYHHRTEFNKKIYKLGKSGQESHTAITEFDRTEKEITPMGGFPHYGVVKDDYFMVRGCCVGPKKRVLTLRQSLLKQTSRVALEDIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121361g00007 173 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 168 IPR045077 GO:0003735|GO:0005840|GO:0006412
Stsc121361g00007 173 FunFam Ribosomal protein L3 49 173 - -
Stsc121361g00007 173 Gene3D Translation factors 35 173 - -
Stsc121361g00007 173 Pfam Ribosomal protein L3 1 154 IPR000597 GO:0003735|GO:0005840|GO:0006412
Stsc121361g00007 173 SUPERFAMILY Translation proteins 1 154 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121361g00007 Stsc-Chr121361 31454 32250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121361g00007 1 171 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 83.626 2.56e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121361g00007 K02925 K10999 zju:107406089 344.739