Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121338g00001 ATGGTTAAGGCCGATAGATGTTTGCCTCGCCCACAGCATGTGGCTTGGCGATATCCATATTTGAATTGCTTTGGCATTCTGGAAGACCCCAGCTTACTCCATCTTCCAGCATGCTTAGATTCTACCACCTGCATCTCTCCTGCTGTCAATGCATTTCAAGGACTTGCAGCTCCTGCTATCCCTAGTCTGAAGACTGAGCCAACAGATGAGTTGAAAGAATTCTTTCAGCATCCCTCTGCAAAACCAAGTTTGAAAGAAGAACATAATGGAGGGTCTTTGCAAAATGCAAATCCTGAATCTTTGCAGAGAAAATTCCTGATTTTTGACCGCTCTGGTAATAAGACACGGATGTTTTATGGTCCTGCCCTCCCTGTTGTTCAGAGTCCAATTATTTCTGCTACAGAATTTCCTCTAGCTTGTGATATAAATGAGAAGGGACGGACAAGTAGTAAGGGTCAAAAGGGTCTAGCCAATTGCAGTTTACCGGAACAGTCTGATAATGATGATGTGGTTCATGATGAAAGTGAAATGCATGAAGACACGGAGGAAATCAATGCACTGCTTTATTCTGATGATGATGATGAGAATGATTATGATGATTGTGATGATGATGAGGTAACAAGTACAGACCGTTCCCCTTTGGTTACTAAAAGGACCTATGATATGCAAGAACAATTTCAACACACAAACGAGGGGGTTGCTAGCTATGACAGGCCTAACAAAAGGCTGAAGATAGTTGATGGTGGCTACGATAGATCATCACAACCTGTTGACAGTTCTAGTTTGTTAAGACCAAATGAAAATCACGAGTGTGTTAGCGATGCTGAATCACAGAATTCTGGTGGCTGGACGTATTCTGCCGGGAAAGTGGGTAATTCAATGGCAGGTGATTTTTGGTTGAAAAAGGATAAGATTCGTGAATCATTGAGAGTTCTTGAGAGCTTGATTCCTGGTGCAAAAGGAAAGGAGCCACTTTTTGTCATTGATCAAACTATTGAGTACTTGAAATCTTTGGCGTCCAAAACTCAAACTCTTGGAGTAAAAAATAATTAA 1053 0.415 MVKADRCLPRPQHVAWRYPYLNCFGILEDPSLLHLPACLDSTTCISPAVNAFQGLAAPAIPSLKTEPTDELKEFFQHPSAKPSLKEEHNGGSLQNANPESLQRKFLIFDRSGNKTRMFYGPALPVVQSPIISATEFPLACDINEKGRTSSKGQKGLANCSLPEQSDNDDVVHDESEMHEDTEEINALLYSDDDDENDYDDCDDDEVTSTDRSPLVTKRTYDMQEQFQHTNEGVASYDRPNKRLKIVDGGYDRSSQPVDSSSLLRPNENHECVSDAESQNSGGWTYSAGKVGNSMAGDFWLKKDKIRESLRVLESLIPGAKGKEPLFVIDQTIEYLKSLASKTQTLGVKNN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121338g00001 350 MobiDBLite consensus disorder prediction 186 206 - -
Stsc121338g00001 350 PANTHER TRANSCRIPTION FACTOR BHLH145 9 348 IPR037546 -
Stsc121338g00001 350 MobiDBLite consensus disorder prediction 166 185 - -
Stsc121338g00001 350 MobiDBLite consensus disorder prediction 147 210 - -
Stsc121338g00001 350 Coils Coil 348 350 - -
Stsc121338g00001 350 MobiDBLite consensus disorder prediction 149 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121338g00001 Stsc-Chr121338 1849 2901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121338g00001 89 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.015 2.33e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121338g00001 - - adu:107480490 543.117