Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121333g00003 ATGGAGGAGACACGAGAAGATGCAGGCCCGTCAGAGCAAGGGCCATCTAATGTTTCATGGTGGCCTTCTGACTTCGTTGAAAAATTTGGATCTGTTTCATTGGGTTCTCAAGACGAGGCCTTAAACAATAAAGAATCCCCAAGACATTCTGGTAATGATATTTTGTCACCTAAAAAAGCGTCACAAATTCTCTGGAGCACAGGAATTCTACAAGAGCCAATTCCAAATGGATTTTATTCAATCATTCCGGACACAAGACTCAAGGAACTTTTTGATAGTATTCCTACCTTGGACGAGCTTCATACTTTGGGTGGAGAGGGTTTTAGTGCTGATATCATTCTTGTGGATTCAGAAAGAGATAAAAAGTTGTCCATGTTAAAGCAACTGATTGTGGCATTAGTTAAAGGATTAAATTCAAATCCAGCTGCGGTTATTAAGAAGATAGCTGGATTAGTTACTGATTTTTATAAGAGACCCAATTTGGAAAGTCCAGCAAAAGCTGCACTAGATGAAACTTCCCACTTGTTTGAGAATCGAGGTGTCCAGATGCTTGGGCAAATTAAACATGGTTCATGCCGTCCTCGAGCCATCTTATTCAAAGTATTAGCTGATACTGTAGGTCTTGAAAGTAGGCTTGTGGTGGGCTTGCCAAATGATGGTACCGTTGAATGTGTAGACTCATACAAACATATGTCTGTGATCGTTGAATTGAATTCTGTGGAAATGCTGGTTGATCTTATGCGATTTCCGGGCCAATTGTTACCGCGATCAACCAAGGCAGTTATTATGACTCATATTTCTGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCTTTATATGGGGTTTCAGAGAGTGCTGAGAAGGAGGAAAACCTCCAATTCCACAGAAGATTTGAAGCTTCTTCGAATCCATCAAGCCGATCCTTGCGTAACATGATGTTACGATCAAACAGTTGTTTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAAGCCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCATCATTTCGGGCACGTGCACGGTCCATGCTAGGCGGTGATAGGACAGCATTCAGAGATTTCACTGATGATCAGGCTACATCAAGATCCAGCTATAGGTCAGATGGCGCATCCTCATCAGAACCTCGTCGGTTACGAAGAAGAAGCATCAGCATTACACCTGAGATTGGTGATGATATTGTTAGGGCTGTGCGGGCAATGAATGAAACCTTGAAGCAAAATCGTTTAATGAGAGAACGAGGGGATGATAATTCATTCTCCCATTCTCGAAACAATCAAAGTAATGAGGCAAATCTTCAGCGAAATGTGTCAAATTTCCATCTTGATGGTCATGACCAAGTGAATTCACAAAAGGCAATGTCATTACCGTCTTCCCCACATGAATATCGAGGTCAATCTTCTGAGAGAAGTGGGCCATCAAGGCGTGGGGTGAATGATGAGCTGGAGTCAACTTGGAATAAAGTCCTTGAATCTCCAATGTTCAACAATAAGCCTCTTTTACCATATGAGGAATGGAATATTAATTTCACTGAATTAACGGTTGGAACTCGTGTAGGGATTGGTTTTTTTGGGGAAGTTTTCCGTGGCATATGGAATGGCACAGAAGTTGCAATCAAGGTTTTCCTGGAGCAAGATTTAACTGCTGAGAACATGGAAGACTTTTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTTGGTGCTTGCACTAAGCCTCCCCGTTTGTCAATGGTTACGGAATACATGGAGATGGGATCATTGTATTACTTGATACATTTGAGTGGTCAAAGCAAAAAGCTTAGTTGGCGGCGAAGACTAAAGATGTTGCGTGACATATGTAGAGGGTTGATGTGCATACACCGTATGAAGATTGTTCACCGAGATCTGAAAAGTGCAAACTGTCTAGTGAACAAGCACTGGACTGTCAAAATATGTGATTTTGGGCTCTCAAGAATAATGACAGAATCTCCCATGCAAGATTCCTCATCTGCCGGAACTCCAGAATGGATGGCCCCTGAACTCATCCGAAATGAACCGTTCACCGAAAAATGTGATATCTTTAGTCTTGGGGTGATAATGTGGGAGCTATGTACCTTGAGCAGACCATGGGAAGGTGTACCACCTGAGAGGGTGGTTTATTCGGTCGCTAACGAAGGTTCCAGATTGGAGATTCCTGAAGGTCCCCTAGGCAGGCTGATTTCAGAGTGTTGGGCAGAATCACATGAACGGCCAAGTTGTGAGGATATTCTTGCACGCTTGTTGGACATCGAGTACTCAATGTGCTGA 2403 0.4286 MEETREDAGPSEQGPSNVSWWPSDFVEKFGSVSLGSQDEALNNKESPRHSGNDILSPKKASQILWSTGILQEPIPNGFYSIIPDTRLKELFDSIPTLDELHTLGGEGFSADIILVDSERDKKLSMLKQLIVALVKGLNSNPAAVIKKIAGLVTDFYKRPNLESPAKAALDETSHLFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVVGLPNDGTVECVDSYKHMSVIVELNSVEMLVDLMRFPGQLLPRSTKAVIMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESAEKEENLQFHRRFEASSNPSSRSLRNMMLRSNSCLSLSHSEPNIATAFGRRSRRKAIAEQRTASSSPEHPSFRARARSMLGGDRTAFRDFTDDQATSRSSYRSDGASSSEPRRLRRRSISITPEIGDDIVRAVRAMNETLKQNRLMRERGDDNSFSHSRNNQSNEANLQRNVSNFHLDGHDQVNSQKAMSLPSSPHEYRGQSSERSGPSRRGVNDELESTWNKVLESPMFNNKPLLPYEEWNINFTELTVGTRVGIGFFGEVFRGIWNGTEVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQSKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMQDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISECWAESHERPSCEDILARLLDIEYSMC 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121333g00003 800 FunFam Serine/threonine-protein kinase isoform 1 534 622 - -
Stsc121333g00003 800 MobiDBLite consensus disorder prediction 375 415 - -
Stsc121333g00003 800 Gene3D Transferase(Phosphotransferase) domain 1 623 799 - -
Stsc121333g00003 800 MobiDBLite consensus disorder prediction 437 463 - -
Stsc121333g00003 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 663 675 IPR008271 GO:0004672|GO:0006468
Stsc121333g00003 800 Gene3D Phosphorylase Kinase; domain 1 537 622 - -
Stsc121333g00003 800 CDD STKc_MAP3K-like 550 792 - -
Stsc121333g00003 800 MobiDBLite consensus disorder prediction 481 511 - -
Stsc121333g00003 800 MobiDBLite consensus disorder prediction 1 21 - -
Stsc121333g00003 800 MobiDBLite consensus disorder prediction 437 451 - -
Stsc121333g00003 800 MobiDBLite consensus disorder prediction 388 403 - -
Stsc121333g00003 800 Pfam Protein tyrosine and serine/threonine kinase 545 791 IPR001245 GO:0004672|GO:0006468
Stsc121333g00003 800 SUPERFAMILY Protein kinase-like (PK-like) 518 791 IPR011009 -
Stsc121333g00003 800 MobiDBLite consensus disorder prediction 481 504 - -
Stsc121333g00003 800 ProSiteProfiles Protein kinase domain profile. 544 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121333g00003 800 SMART serkin_6 544 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121333g00003 800 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Stsc121333g00003 800 ProSitePatterns Protein kinases ATP-binding region signature. 550 571 IPR017441 GO:0005524
Stsc121333g00003 800 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 328 792 - -
Stsc121333g00003 800 MobiDBLite consensus disorder prediction 36 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121333g00003 Stsc-Chr121333 28851 37818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121333g00003 1 800 MAP Kinase Kinase Kinase AT3G58640 71.376 0.0 1196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Stsc121333g00003 PK_Tyr_Ser-Thr 5.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121333g00003 - - aprc:113853840 1437.94