Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121327g00006 ATGTCTCAAGCACCAACTGCAAAACATCGTTGTTTCTCTGGTTTCTTACACACCCTTCTTTGTGATGGAAATGGAAACATTTCTGATCAAATCATAGAGTCATATGAAACACATCAAGTGCATCCAAATAAGAAGAGTGCAATGGTTAATGCAGCTTCTACACCAGGAGTGATAGTAAGGCTGATGGGGTTAGATTCAATGCCAAATAATCCCAACTCAGAATTTAAAGAAACCATCCCAGATTCTGTTCCAAGGAGTAAATCAATGAATTTTTTGGATTACATGTTGGAGTTTGATGATGCAAGCCAATCCAACCATCGCCGGGCGAAAATCTCGGCTTCATCCAGGGAGGTTCCTGAACTGTTTCGGCACAAGAACCGCCGCGAAGTTCTTGTGCCGTGTTGGGACAGTGGAAGAAGAGACAGTAAGGAATGGAAGAGCAGGAAAATTTGCAAGTTGAAAAATGAGCCAAGAATTGTAAACAATGGTTGTTCAAAGTTTATAAGAAGTTACAAAGATTCTAATTGCAGTCACAGAAAAAGTGATTGTGGACCAAGGTCAAGCACTAGATTGAAAAATAAGCAGATTGAAGAACTCTTTGAACCAAAGCAGATGAAAAATTTGAGAATGCAATGGTCAAAAAAGAAGATAGAGAGTGAATATAGCTCACAAGATCTTTGCTCAGTTTCAATCCTAGACATCAATGACTATAAGTACCTCTATGGACCTGATTTTCTAGATTACACAAGCCCCTTAATGTCACCAACAATGTGGGGATCTTCAGAGAAACAGTTCTTGGGCAATAGAATTGAAGACAGAGCAATGAAAGATAAAAGCTACACCTATCCCTGCATCCATAGGGAACAAAAAGAGTGTCCCTCAGAATTAGAGATGAAGCTTTTCAACTTAATTGAAAATGATATGAAGGAATTATATTTCACACAGAAGGGTATGCGTGAGACTGAAAGATTTGAAGAGATTGGTTTGGTGTATGAGAATCACATTTTTAACACTTTGCTGCATGAAATTGTGAACGAACTTGTAGAAACATTCTAG 1056 0.3845 MSQAPTAKHRCFSGFLHTLLCDGNGNISDQIIESYETHQVHPNKKSAMVNAASTPGVIVRLMGLDSMPNNPNSEFKETIPDSVPRSKSMNFLDYMLEFDDASQSNHRRAKISASSREVPELFRHKNRREVLVPCWDSGRRDSKEWKSRKICKLKNEPRIVNNGCSKFIRSYKDSNCSHRKSDCGPRSSTRLKNKQIEELFEPKQMKNLRMQWSKKKIESEYSSQDLCSVSILDINDYKYLYGPDFLDYTSPLMSPTMWGSSEKQFLGNRIEDRAMKDKSYTYPCIHREQKECPSELEMKLFNLIENDMKELYFTQKGMRETERFEEIGLVYENHIFNTLLHEIVNELVETF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121327g00006 351 PANTHER OS05G0128300 PROTEIN 2 350 - -
Stsc121327g00006 351 Pfam DUF761-associated sequence motif 54 70 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121327g00006 Stsc-Chr121327 27076 28284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121327g00006 1 118 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 28.477 8.20e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121327g00006 - - aip:107626941 496.508