Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121327g00002 ATGGAGAGATTCTTTAGGAAGATTGAAGAAATATCCAGACAAAAAGGAGGTTACAGGGGGCAGAGGGAAGAGTATGTAAAGCGAATTCTAGATGTTTGTGGACTACACCCTCAAATTGGAATTCCAGTTCTCAAGGAGAGATCACTCATAGCCATTAAGAACCAAGAGATTCATATGCATGACATGTTACAAGAATTGGGTAAGAAACTTGTTCGGGAAAAATATCCTGAAGAGCCAGCATTGTGGAGCAGAGTATGGCTTTGTGGTGATTTTGAAAGTGCTTTGATGTCAGTCGAGAAGGGAACAAACAATGTTAAAGCCATGGTCTTAGATCAGAAAAAGTATATGCCCGAGTCCAGGCAATTGAGGATCGAAGGATTGTCAAGATTTAAGGATCTTAAATTGCTTATATTATACCATAAAAACTTTTTAGGAAGCCTTGATTTTCTTTCCTCAAATCTACAATATCTTGGTTGGCATGGCTATCCTTTCCCTTCTTTGCACACCCCCACATCCAACAGAAACCTATTCAAATGGCCACAACTTTCAAGATTACTATTTATCATGCAATTTGGTGAACAAAAAACAAAAATCAGAGAACTTACACTTTATTTCACCAAGTTTACACTTTATATTTGCTTAATAGAGAAATCAGTTATATTGGACAAAGTAAACCCAGATCTAACTTGA 690 0.3696 MERFFRKIEEISRQKGGYRGQREEYVKRILDVCGLHPQIGIPVLKERSLIAIKNQEIHMHDMLQELGKKLVREKYPEEPALWSRVWLCGDFESALMSVEKGTNNVKAMVLDQKKYMPESRQLRIEGLSRFKDLKLLILYHKNFLGSLDFLSSNLQYLGWHGYPFPSLHTPTSNRNLFKWPQLSRLLFIMQFGEQKTKIRELTLYFTKFTLYICLIEKSVILDKVNPDLT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121327g00002 229 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 178 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121327g00002 Stsc-Chr121327 11215 12503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121327g00002 18 164 WRKY Transcription Factor Family AT5G45050 24.551 6.19e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121327g00002 - - ccaj:109817829 196.438