Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121320g00003 ATGGCTGAGCCACAACGTGGTGACGCCAGTGGCGGCAGCGATCATGGCACCAATTTGGGAACACGACGCAAAGGTGCGGCAGCAAAGCATGCCATGGCGGCGGCCGAGGCAGCTTCAACATCGCCTCCATGCGGTGCATGCAAATTCTTGAGGAGGAAGTGCATCAGCGGCTGCATCTTTGCACCCCACTTTGGCTCCGACCAAGGCGCGGCTCGGTTCGCGGCCGTGCACAAGGTGTTTGGTGCGAGCAACGTGTCAAAACTGTTGTTGCATATTCCGGTGAACCGGCGGCATGAGGCGGTGGTAACCATATCGTATGAGGCACAGGCAAGGCTGTCTGATCCGGTGTATGGTTGTGTCTCCACAATTCTTGCTTTGCAACAACAGAGTCATAGCAATAAGACTTATTTTCAGGTGACATCATTGCAAGGGGAGCTTTCTATGGTGCAAAATCAGCTGATAAATTCTAGGCTTGCATATGCAAATGTTCTTCATCATCATCAATGCACGCAACAGCATCATCATCACCATCATAATCAGCCAAACATGATCAATGTATCTTTATTACAACAACCAGCATACTCCAACAATAACTCATCTGCTTCAACCAATAATAACCTTGTCAACATGAACACCTTCAATAATAATAACAACCATTCAGGTTTTTAG 669 0.4828 MAEPQRGDASGGSDHGTNLGTRRKGAAAKHAMAAAEAASTSPPCGACKFLRRKCISGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQSHSNKTYFQVTSLQGELSMVQNQLINSRLAYANVLHHHQCTQQHHHHHHNQPNMINVSLLQQPAYSNNNSSASTNNNLVNMNTFNNNNNHSGF 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121320g00003 222 MobiDBLite consensus disorder prediction 1 26 - -
Stsc121320g00003 222 MobiDBLite consensus disorder prediction 195 222 - -
Stsc121320g00003 222 Pfam Lateral organ boundaries (LOB) domain 43 138 IPR004883 -
Stsc121320g00003 222 ProSiteProfiles LOB domain profile. 42 146 IPR004883 -
Stsc121320g00003 222 PANTHER LOB DOMAIN CONTAINING PROTEIN 40 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121320g00003 Stsc-Chr121320 24811 25929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121320g00003 1 214 AS2 family AT3G03760 58.261 4.63e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc121320g00003 LOB 1.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121320g00003 - - ahf:112698228 285.804