Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121318g00004 ATGTCTTCCAACAAGAAAGGAATCATGAGAACTCTACTCTCATCAAATGGTGGCTGCGGCTGCGGCAAACAGAAACAGTCAGTTCACCAACCAGCCCCAAAACCTAAGATCTCGGTTTACCAAAATACAAACCCTAGCACTTCCTCCACCACTTCCGATGAGGACTTCACCTCCACCACCATCTCTGAAACTGAGACTCATCACCAAGACCACAACAATAATGACAACAAGGGCATTGCGAAGAATAATGTAAGTAGTACCTCATTAATAAAACATAACCCTAATAAAATCATTGACAGCATAGCGGTTGAGAAGGAATCCACAGATCCTTATAGGGATTTCAGGTATTCAATACTTCAAATGATCTTTGAAAAAGAAATCTTCTCCGAATCTGGTCTTCAAGAGCTTCTGCAATGCTTTCTGGAGCTGAATTCGCCATGTCAGCACCAAATCATTGTTCAGGCATTCATGGAGATCTGTGAAGAGACCTTCCCTAAGAAGTTCTGTGAAGGTGAACCCTCTTCCAGAAGGTAG 534 0.427 MSSNKKGIMRTLLSSNGGCGCGKQKQSVHQPAPKPKISVYQNTNPSTSSTTSDEDFTSTTISETETHHQDHNNNDNKGIAKNNVSSTSLIKHNPNKIIDSIAVEKESTDPYRDFRYSILQMIFEKEIFSESGLQELLQCFLELNSPCQHQIIVQAFMEICEETFPKKFCEGEPSSRR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121318g00004 177 MobiDBLite consensus disorder prediction 36 59 - -
Stsc121318g00004 177 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
Stsc121318g00004 177 NCBIfam uncharacterized plant-specific domain TIGR01568 101 160 IPR006458 -
Stsc121318g00004 177 MobiDBLite consensus disorder prediction 1 81 - -
Stsc121318g00004 177 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 163 IPR038933 GO:0045892
Stsc121318g00004 177 MobiDBLite consensus disorder prediction 60 75 - -
Stsc121318g00004 177 MobiDBLite consensus disorder prediction 1 23 - -
Stsc121318g00004 177 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Stsc121318g00004 177 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121318g00004 Stsc-Chr121318 21758 22685 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc121318g00004 Ovate 2.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121318g00004 - - lang:109350845 176.792