Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121305g00003 | ATGGATGCAGGGGAGACACAGCCAATGAAATGGGCAATGAGGTTGAGGGTGGCATTGTACTTAGCTCAAGCTCTAGATTATTGCACAAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTATAGAATCTTGTTTGACCAGGATGGTAATCCTAGGTTGTCTTGCTTTGGCCTCATGAAGAACAGCAGAGATGGCAAGAGCTACAGCACTAATTTGGCTTTCACCCCTCCTGAGTATCTAAGGACCGGGAGAGTGACAGCAGAGAGTGTGGTTTATAGTTTTGGAACATTGTTGCTTGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGACCTGATAAGGGGGAAGAATTTCTTGATGTTAATGGATTCAGCATTAGAGGGACACTTCTCAAAGGATGATGGAACTGAGTTGGTTCGTTTGGCTTCTCGTTGTTTGCAGTATGAAGCTCGTGAGAGGCCAAATGCTAAGTCTCTTGTTGCTTCTCTCATCTCACTTCAGAAACAAACTGAGGTTCCTTCACATGTTCTGATGGGTTTGAAGAATGAAAGTGAATTATCGTCAACAAAGCAAATGCCATTGACACCTTTTGGGGAAGCTTGTTTAAGAGTGGACCTTACTGCCATACATGAAATATTAGAGAAGACTGGTTACAAAGATGATGAAGGAATTGCCAATGAGCTTTCATTTCAATTGTGGACCAGTCAAATGCAGGAGACGTTGAATTTGAAGAAGCATGGAGATACTGCTTTTCGAGCTAAGGACTTTCTCACTGCCATTAACTGCTATACTCAATTCATAGATGGAGGAACAATGGTATCACCAACAGTGTATGCAAGGAGGTGCTTATCATATTTGATGAATGAGAAGGGAGAAGAAGCATTAGCAGATGCAATGCAAGCCCAAGCAGTGTCTCCAGAATGGCCCACTGCTTTGTATCTCCAAGCAGCTTGTCTCTTCACCCTTGGAATGGAAACTGATGCTCAACAAACTCTTAAGGATGCCACTAACATGCAACCCAAATCAAACAAAATTTGTACATAA | 1056 | 0.4252 | MDAGETQPMKWAMRLRVALYLAQALDYCTSKGRGLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVASLISLQKQTEVPSHVLMGLKNESELSSTKQMPLTPFGEACLRVDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFLTAINCYTQFIDGGTMVSPTVYARRCLSYLMNEKGEEALADAMQAQAVSPEWPTALYLQAACLFTLGMETDAQQTLKDATNMQPKSNKICT | 351 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121305g00003 | 351 | FunFam | probable serine/threonine-protein kinase At4g35230 | 242 | 351 | - | - | |
Stsc121305g00003 | 351 | FunFam | probable serine/threonine-protein kinase At5g41260 | 2 | 184 | - | - | |
Stsc121305g00003 | 351 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 177 | IPR011009 | - | |
Stsc121305g00003 | 351 | Pfam | Protein kinase domain | 17 | 165 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc121305g00003 | 351 | ProSiteProfiles | Protein kinase domain profile. | 1 | 182 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc121305g00003 | 351 | Gene3D | Tetratricopeptide repeat domain | 238 | 350 | IPR011990 | GO:0005515 | |
Stsc121305g00003 | 351 | SUPERFAMILY | TPR-like | 245 | 346 | IPR011990 | GO:0005515 | |
Stsc121305g00003 | 351 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 185 | - | - | |
Stsc121305g00003 | 351 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 5 | 347 | IPR045845 | GO:0004672|GO:0009742 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121305g00003 | Stsc-Chr121305 | 21323 | 24680 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121305g00003 | 8 | 167 | Glycoside Hydrolase | AT3G07070 | 34.595 | 4.35e-21 | 91.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Stsc121305g00003 | Pkinase | 6.7e-13 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121305g00003 | - | - | gmx:100814477 | 631.328 |