Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121293g00006 ATGGAGCTTTCCGCATTCCCGAGGTTCAGAGCAGTTTCTAATCCTTCCATTTCCCCTTTCTCTTCCAAACAAGTTTGTTGCTGGTTCTCTCTTCTTCTTCGTCGCCGCGACTACGGCCTTCGCTGGAACCGAAATTCGAAACCGTTTGTTCGAATCAGGTTGTGCTTGGAGAATGCTTCGTCGTCGAACGGTTATGGCGGATCCGAGAGCGGAGAAGCTAAACCTGAGTTCATCGAAGTCATCGGCATTGGCAGTCGGAAGGACGCTGTTCTCGATTTCTGCTTGAGATCGCAGTTTCAGCTCTCGTCGCTGCGATTTTGGAATGTCCTAATGAAAGAATCAAATGAGGCACAGTTACAGCTTAAATCAAGGGAAGAAGAATTTTCTCCGACAATTGTCAAATCTCCAGTATTTATGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCTAGTGCAGGATATGGATCGGACCTTACTGTTGCAGTTGATATTTTTGAAACTGTGAGGTCCACAAATGGGTTAGCAGTTGCTATAGTTTTGAGGCCTTTTAGCTTTGAAGGGTTAAGACGGCAGGATGAGGTGATGGATTTGGTGGGGAAGCTTAAGGAGAGCACGAATTTAATTATAGAAATTGATATTGATGCACTGCTTCAAAAAGATTTGTTGACTCTAGATGAGGCCATGAAGACTGCAAACAATGCAGTTTTGTTGGCTATTAAGGCCATATATGTATTAAAATCTGAGATGTATAAAAAACTTATAGATAGATTGCATGATGGTATGATAGAAGCCAGCACTTTAGTAGTTGATAAAATATTGGAAAACTATAAAGAAGCAGGGATTGGATTTGGAGCTGCATATGACATCAAAACCTCAATTTTGCAGTCTATATTTGAGTGTCCTTTCCTTGGTGTTCATTTGAAGGATCCAACTAGCATTGTTATATGCATTCTTGCTAGTTCAGTGCCCATTAATGATAGCGATATAGCAGCCTTTCTGCGTACATTCCGGCAAACTACAGCATATAAAGGGGACATTATAGTATCCACAATCTGTGAGCCAAATGTTGAGCCCAACTTATGGATAACAACTGTCCTGGCACTTGGCAGTTCAAAATTGAAACAATCTGTCCAGAGTATTGGTATACTGGCCAGACTGGCCCTGCATTTTCCTCGTGTTTTTAGCTTTTGGGGGACGCATAACCAGCAACAAGTTCACGTGGGGAAAGAGTGTGCAACATCTTCTCAGAAAGTGATGGAGTCTTATGAAATGAAGGAGGAGAGTAGGAATGCTGCAGATTCTGTAGATGGCAGTTTTAGTAATCATGATGAACAGTTGAAGCCAAGAGTGAACAGCAGCAGCTCAAAGTTGGCTACTTTGAGGTTTTCTGAAAAAGAAGATATGTATGACTCTGTAGCCCAGAATTCTCTCCCTGTTGACTCTATTACCGAAGATGACTCTGCTTTTGAAAGGGAGCAACTTGAAAACTGGAATCTGGGTCCTGGATATGAGGTGGCAAGGGAGTGGGCCCAAGAAAGGGTAGCTAATGCGGCGCATATGATTGATAACCTAAGCATATTCCATCTTCCTGTAGGTGTGAGGCCTTCAGAAGATTTGAAAGATTGTTCAAAAGTCTCATTCATGACAGAACTGAAGGATCTGGAATTCAATGAAGTAAATCTATCAACAATAAATGAGGGCATGTCTTGGAATGCAGTGACTGATGCAAGTTTAGAAGCAGTAAAGGGATTGGCATCTTCACTTTTGAAGGGTAAAGATGCTTCTAAACCAAAGAAACATGGAGTACTATCTAATAGAGCTGCTTCTATGCTGGAGGCTGAACGGGACTTGTCAAAAAAGTGGAATCCTGTTATGGAAATGCAATACAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGCCTTCCTGAAGGAAAGGGGCGTCTTGTTCTTGGAGATGGAAGTATATATGATGGTTCATGGCGCCATGGTAAGAGATCAGGCTCAGGTACCTTCTATTTCAAAAATGGAGACATGTTTCAAGGATCATGGAGGGATGATGTCATGCACGGCAAGGTTCATATGATTTTGATGTTAACTTTTCAATTATGA 2112 0.4219 MELSAFPRFRAVSNPSISPFSSKQVCCWFSLLLRRRDYGLRWNRNSKPFVRIRLCLENASSSNGYGGSESGEAKPEFIEVIGIGSRKDAVLDFCLRSQFQLSSLRFWNVLMKESNEAQLQLKSREEEFSPTIVKSPVFMKSCSKTIVLVASAGYGSDLTVAVDIFETVRSTNGLAVAIVLRPFSFEGLRRQDEVMDLVGKLKESTNLIIEIDIDALLQKDLLTLDEAMKTANNAVLLAIKAIYVLKSEMYKKLIDRLHDGMIEASTLVVDKILENYKEAGIGFGAAYDIKTSILQSIFECPFLGVHLKDPTSIVICILASSVPINDSDIAAFLRTFRQTTAYKGDIIVSTICEPNVEPNLWITTVLALGSSKLKQSVQSIGILARLALHFPRVFSFWGTHNQQQVHVGKECATSSQKVMESYEMKEESRNAADSVDGSFSNHDEQLKPRVNSSSSKLATLRFSEKEDMYDSVAQNSLPVDSITEDDSAFEREQLENWNLGPGYEVAREWAQERVANAAHMIDNLSIFHLPVGVRPSEDLKDCSKVSFMTELKDLEFNEVNLSTINEGMSWNAVTDASLEAVKGLASSLLKGKDASKPKKHGVLSNRAASMLEAERDLSKKWNPVMEMQYRGGRYKGRCQGGLPEGKGRLVLGDGSIYDGSWRHGKRSGSGTFYFKNGDMFQGSWRDDVMHGKVHMILMLTFQL 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121293g00006 703 SUPERFAMILY Tubulin nucleotide-binding domain-like 78 244 IPR036525 -
Stsc121293g00006 703 Gene3D - 636 700 - -
Stsc121293g00006 703 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 101 692 - -
Stsc121293g00006 703 Gene3D Tubulin/FtsZ, GTPase domain 113 369 IPR036525 -
Stsc121293g00006 703 MobiDBLite consensus disorder prediction 424 450 - -
Stsc121293g00006 703 Pfam MORN repeat 680 692 IPR003409 -
Stsc121293g00006 703 Pfam MORN repeat 657 679 IPR003409 -
Stsc121293g00006 703 Pfam MORN repeat 639 655 IPR003409 -
Stsc121293g00006 703 SMART morn 655 676 IPR003409 -
Stsc121293g00006 703 SMART morn 632 653 IPR003409 -
Stsc121293g00006 703 MobiDBLite consensus disorder prediction 433 450 - -
Stsc121293g00006 703 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 631 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121293g00006 Stsc-Chr121293 6591 13325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121293g00006 1 692 PP2C-type Phosphatase Gene Family AT1G75010 40.709 2.87e-156 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121293g00006 - - gsj:114371951 903.664