Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121293g00005 ATGGAGCTTTCCGCATTCCCGAGGTTCAGAGCAGTTTCTAATCCTTCCATTTCCCCTTTCTCTTCCAAACAAGTTTGTTGCTGGTTCTCTCTTCTTCTTCGTCGCCGCGACTACGGCCTTCGCTGGAACCGAAATTCGAAACCGTTTGTTCGAATCAGGTTGTGCTTGGAGAATGCTTCGTCGTCGAACGGTTATGGCGGATCCGAGAGCGGAGAAGCTAAACCTGAGTTCATCGAAGTCATCGGCATTGGCAGTCGGAAGGACGCTGTTCTCGATTTCTGCTTGAGATCGCAGTTTCAGCTCTCGTCGCTGCGATTTTGGAATGTCCTAATGAAAGAATCAAATGAGGCACAGTTACAGCTTAAATCAAGGGAAGAAGAATTTTCTCCGACAATTGTCAAATCTCCAGTATTTATGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCTAGTGCAGGATATGGATCGGACCTTACTGTTGCAGTTGATATTTTTGAAACTGTGAGGTCCACAAATGGGTTAGCAGTTGCTATAGTTTTGAGGCCTTTTAGCTTTGAAGGGTTAAGACGGCAGGATGAGGTGATGGATTTGGTGGGGAAGCTTAAGGAGAGCACGAATTTAATTATAGAAATTGATATTGATGCACTGCTTCAAAAAGATTTGTTGACTCTAGATGAGGCCATGAAGACTGCAAACAATGCAGTTTTGTTGGCTATTAAGGCCATATATGTATTAAAATCTGAGATGTATAAAAAACTTATAGATAGATTGCATGATGGTATGATAGAAGCCAGCACTTTAGTAGTTGATAAAATATTGGAAAACTATAAAGAAGCAGGGATTGGATTTGGAGCTGCATATGACATCAAAACCTCAATTTTGCAGTCTATATTTGAGTGTCCTTTCCTTGGTGTTCATTTGAAGGATCCAACTAGCATTGTTATATGCATTCTTGCTAGTTCAGTGCCCATTAATGATAGCGATATAGCAGCCTTTCTGCGTACATTCCGGCAAACTACAGCATATAAAGGGGACATTATAGTATCCACAATCTGTGAGCCAAATGTTGAGCCCAACTTATGGATAACAACTGTCCTGGCACTTGGCAGTTCAAAATTGAAACAATCTGTCCAGAGTATTGGTATACTGGCCAGACTGGCCCTGCATTTTCCTCGTGTTTTTAGCTTTTGGGGGACGCATAACCAGCAACAAGTTCACGTGGGGAAAGAGTGTGCAACATCTTCTCAGAAAGTGATGGAGTCTTATGAAATGAAGGAGGAGAGTAGGAATGCTGCAGATTCTGTAGATGGCAGTTTTAGTAATCATGATGAACAGTTGAAGCCAAGAGTGAACAGCAGCAGCTCAAAGTTGGCTACTTTGAGGTTTTCTGAAAAAGAAGATATGTATGACTCTGTAGCCCAGAATTCTCTCCCTGTTGACTCTATTACCGAAGATGACTCTGCTTTTGAAAGGGAGCAACTTGAAAACTGGAATCTGGGTCCTGGATATGAGGTGGCAAGGGAGTGGGCCCAAGAAAGGGTAGCTAATGCGGCGCATATGATTGATAACCTAAGCATATTCCATCTTCCTGTAGGTGTGAGGCCTTCAGAAGATTTGAAAGATTGTTCAAAAGTCTCATTCATGACAGAACTGAAGGATCTGGAATTCAATGAAGTAAATCTATCAACAATAAATGAGGGCATGTCTTGGAATGCAGTGACTGATGCAAGTTTAGAAGCAGTAAAGGGATTGGCATCTTCACTTTTGAAGGGTAAAGATGCTTCTAAACCAAAGAAACATGGAGTACTATCTAATAGAGCTGCTTCTATGCTGGAGGCTGAACGGGACTTGTCAAAAAAGTGGAATCCTGTTATGGAAATGCAATACAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGCCTTCCTGAAGGAAAGGGGCGTCTTGTTCTTGGAGATGGAAGTATATATGATGGTTCATGGCGCCATGGTAAGAGATCAGGCTCAGGTACCTTCTATTTCAAAAATGGAGACATGTTTCAAGGATCATGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAAGCCAATGGTGAGGGGCGGTTCTACAGCAAGTCTGGTGATGCCTTCTTCGGGAATTTCAAAGATGGTTGGCGGCAAGGCCAATTTCTTTGCATCAATGCTAACGGAACGAGGTATAAGTAG 2253 0.4283 MELSAFPRFRAVSNPSISPFSSKQVCCWFSLLLRRRDYGLRWNRNSKPFVRIRLCLENASSSNGYGGSESGEAKPEFIEVIGIGSRKDAVLDFCLRSQFQLSSLRFWNVLMKESNEAQLQLKSREEEFSPTIVKSPVFMKSCSKTIVLVASAGYGSDLTVAVDIFETVRSTNGLAVAIVLRPFSFEGLRRQDEVMDLVGKLKESTNLIIEIDIDALLQKDLLTLDEAMKTANNAVLLAIKAIYVLKSEMYKKLIDRLHDGMIEASTLVVDKILENYKEAGIGFGAAYDIKTSILQSIFECPFLGVHLKDPTSIVICILASSVPINDSDIAAFLRTFRQTTAYKGDIIVSTICEPNVEPNLWITTVLALGSSKLKQSVQSIGILARLALHFPRVFSFWGTHNQQQVHVGKECATSSQKVMESYEMKEESRNAADSVDGSFSNHDEQLKPRVNSSSSKLATLRFSEKEDMYDSVAQNSLPVDSITEDDSAFEREQLENWNLGPGYEVAREWAQERVANAAHMIDNLSIFHLPVGVRPSEDLKDCSKVSFMTELKDLEFNEVNLSTINEGMSWNAVTDASLEAVKGLASSLLKGKDASKPKKHGVLSNRAASMLEAERDLSKKWNPVMEMQYRGGRYKGRCQGGLPEGKGRLVLGDGSIYDGSWRHGKRSGSGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYSKSGDAFFGNFKDGWRQGQFLCINANGTRYK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121293g00005 750 SMART morn 655 676 IPR003409 -
Stsc121293g00005 750 SMART morn 632 653 IPR003409 -
Stsc121293g00005 750 SMART morn 724 745 IPR003409 -
Stsc121293g00005 750 SMART morn 678 699 IPR003409 -
Stsc121293g00005 750 Gene3D Tubulin/FtsZ, GTPase domain 113 369 IPR036525 -
Stsc121293g00005 750 SUPERFAMILY Tubulin nucleotide-binding domain-like 78 244 IPR036525 -
Stsc121293g00005 750 Pfam MORN repeat 680 702 IPR003409 -
Stsc121293g00005 750 Pfam MORN repeat 657 679 IPR003409 -
Stsc121293g00005 750 Pfam MORN repeat 707 724 IPR003409 -
Stsc121293g00005 750 Pfam MORN repeat 639 655 IPR003409 -
Stsc121293g00005 750 MobiDBLite consensus disorder prediction 424 450 - -
Stsc121293g00005 750 Gene3D - 686 750 - -
Stsc121293g00005 750 Gene3D - 636 685 - -
Stsc121293g00005 750 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 631 749 - -
Stsc121293g00005 750 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 101 749 - -
Stsc121293g00005 750 MobiDBLite consensus disorder prediction 433 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121293g00005 Stsc-Chr121293 5248 13325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121293g00005 1 749 PP2C-type Phosphatase Gene Family AT1G75010 43.963 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121293g00005 - - gsj:114371951 1028.85