Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121282g00001 ATGGATGCTCGAAGCTATTACTTCGATTCGGAATCTGCAAATGGCGCAGAATCAAGCGTGCATTTTTGCCTTGACGTGGATGAGGAGTATATTCCAAAGGGTGGAATGATTTTTCCATCACTTGAAGTAGCTGCTGATTTCTACAAAGAATATGCTAAACGTGCTGGGTTTTCTACTAAAATAAGGAACACCAATAGGTGTAGAAAAACCAAGGAAATAAAGAATCAACTCATCACATGTAAGAGAGAGGGGAAATGGATATCCGAAATACCGTACGTTGAGAAGATGAAGGCTCTCTTTTCTGGATGTTCCTTCAAGTAG 321 0.4019 MDARSYYFDSESANGAESSVHFCLDVDEEYIPKGGMIFPSLEVAADFYKEYAKRAGFSTKIRNTNRCRKTKEIKNQLITCKREGKWISEIPYVEKMKALFSGCSFK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121282g00001 106 Pfam FAR1 DNA-binding domain 46 85 IPR004330 -
Stsc121282g00001 106 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121282g00001 Stsc-Chr121282 9793 10770 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc121282g00001 FAR1 2.6e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121282g00001 - - adu:110280446 85.8853