Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121281g00002 ATGGCTGACGAGGACTTTGATTTCACCGACAAAGTCCCTCCGTCCTTCGATCGCGCGGGAAATTCTGCATCCCAAGGACTCAACCCAGGCTTAATAGTTCTGATTGTTGTGTTTGGGTTGGTGCTTGTATTCCTTGTTGGAAACTTTGTGCTCTACACGTATGCACAGAAGAACCTCCCTCCTAGAAAAAAGAAGCCAGTGTCAAAGAAGAAGATGAAGAGGGAGAGACTGAAGCAAGGCATCTCTGCACCTGGGGAATAA 261 0.4751 MADEDFDFTDKVPPSFDRAGNSASQGLNPGLIVLIVVFGLVLVFLVGNFVLYTYAQKNLPPRKKKPVSKKKMKRERLKQGISAPGE 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121281g00002 86 MobiDBLite consensus disorder prediction 60 86 - -
Stsc121281g00002 86 Pfam DNA binding protein S1FA 22 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Stsc121281g00002 86 PANTHER DNA-BINDING PROTEIN S1FA2 5 86 IPR006779 GO:0003677|GO:0005634|GO:0006355
Stsc121281g00002 86 MobiDBLite consensus disorder prediction 62 76 - -
Stsc121281g00002 86 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121281g00002 Stsc-Chr121281 14210 15995 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Stsc121281g00002 S1FA 2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121281g00002 - - adu:107493441 135.191