Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121279g00010 ATGAATTTTATTTCATCACTATTTTTGTTTATTACCACAATCTCCTTTTGGATTTATGGAGCCAAAGGTATTAATAATTGTGGTGGAAATAACATTGTAAACACTATAGTTGTGAATCAACAAGGTGGCAATGGCGTATTTACAAAAGTTCAAGATGCCATTGATTCTATTCAATCCAATAATGATCAATGGGTCAAGATTTATATTAATCCTGGCATTTACACAGAAAAGGCTCGTCTTCCCAAGGATAAGCCATGTGTGATTTTAGAAGGAGCAAGCATACACAACACAGTAATCACATATGATGATCATCTACCAGCAAATCCAAGTGCTACATTCGTTTTTGATGCATCCAATGTGATTGTCAAAGATATTACTTTCAAGAACTCATATAATGTAGCAAAGTTGCCAAGGAAAATAAAAGAGAGAAAGATGCAAGAAAGACAAATTGTTCCAGCAGTTGCAGCTAGTGTATATGGTGACAACAATACCTTCTATAGATGTGGTTTTATTGGTTATCAAGACACCTTATTTGATGCATCGGGAAGACATTATTATAAAGAGTGTTACATCGAAGGTGAAGTAGATTTCATTTTTGGTTATGCTCGCTCGTATTATGAGCAATGCATAATGAATGCCATAGGGAGGGACATCAATCTTCCAGGGTTTGTAACAGCACATGGACGAGGAAAACCAGAAGGTGATCCTAATGGTGGATTTGTATTTAACAGATGTGCAATAATTGGAACTGGAAATGTGAATTTGGGAAGAGCATGGGGTCCTTTTGCTAGAGTTATTTTTCATGGAACTTATTTTGGATCTTTAATAACCCCTCAAGGTTGGGATGCTTGGAACGGTAAAGGACAAGAGTATAAAATCACATTTGCAGAAGTGAATTGTAAAGGACCAGGACGCAATACTAATGATCGGGTTTCATGA 939 0.3621 MNFISSLFLFITTISFWIYGAKGINNCGGNNIVNTIVVNQQGGNGVFTKVQDAIDSIQSNNDQWVKIYINPGIYTEKARLPKDKPCVILEGASIHNTVITYDDHLPANPSATFVFDASNVIVKDITFKNSYNVAKLPRKIKERKMQERQIVPAVAASVYGDNNTFYRCGFIGYQDTLFDASGRHYYKECYIEGEVDFIFGYARSYYEQCIMNAIGRDINLPGFVTAHGRGKPEGDPNGGFVFNRCAIIGTGNVNLGRAWGPFARVIFHGTYFGSLITPQGWDAWNGKGQEYKITFAEVNCKGPGRNTNDRVS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121279g00010 312 Gene3D - 29 312 IPR012334 -
Stsc121279g00010 312 SUPERFAMILY Pectin lyase-like 34 311 IPR011050 -
Stsc121279g00010 312 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 312 - -
Stsc121279g00010 312 FunFam Pectinesterase 30 312 - -
Stsc121279g00010 312 Pfam Pectinesterase 37 312 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121279g00010 Stsc-Chr121279 39741 42541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121279g00010 2 290 Carbohydrate Esterase AT2G19150 41.781 7.45e-68 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121279g00010 - - nnu:104602237 303.908