Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121276g00006 ATGTCGGCACAACCGTGCGCGACGGATATCCTCACCCGCGCCACCTCCTGCCGCGACGGATCCGCGGCGGCGCACCTCAAGTTTATCTCCATCTTCGTCATCTTCTTCACCAGCATGTTCGGTATGTCCTCTCCCGTCCTCCTCGCCCGCCTCTTCCAAGGAAAGTCACTGTACGACCGCGCCGTCGCTCTCATCAAGTGCTTCGCCGCCGGCGTCATTCTCTCCACCTCACTCGTCCACGTCCTCCCTGACGCTTACGCCTCACTCGCCGACTGCCGCGTCGCCACGCGCCATCCCTGGCGCGACTTCCCCTTCTCCGGCCTCGTAACCCTAATCGGCGCACTCCTCGCGCTCGCCGTCGACCTCGTCGCAAGCTCTCACGTGGAGCACTCGCAGTACGCGCCGGTGAAGACGAACGAGAAGGAGTCATCGTCGGGGGAATCGAGAATCGAACTCGGCGGAGGAGGAGCAGGATGTCACGGCGGCGATAACGGCGTAGCAGTGGCGGCGGGAGGATCTGCGGCAGCGGTGGAGGAGGAAGTGTTGTTGAGGTTGAAGCAAAAAATGGTTTCTCAGGTATTGGAGATTGGGATAATATTCCATTCGGTGATAATTGGGGTTACGATGGGAATGTCTCAGAACGTTTGCACGATACGGCCTCTCGTTGCTGCTTTGGCTTTTCATCAGATTTTTGAAGGGATGGGTCTTGGTGGCTGCGTTGCTCAGGCTGGATTTAGCTTTGGAACAATGGTATATATGTGCTTCATGTTCTCAGTGACAACTCCAATGGGCATAGTTTTGGGGATGGCAATATTTTCACTCACAGGGTATGATGATAGTAACCCAAATGCACTAATCATAGAAGGGTTATTAGGTTCAGTTTCCTCAGGAGTACTGATTTACATGGCCCTTGTTGATCTCATTGCTGTTGATTTCTTTCATAACAAGCTTATGAACTCTAATCCAAAGTTGAAAAAGGCATCTTTTCTTGCCTTAACTCTGGGTTCTGCTGCTATGTCTATTCTTGCACTCTGGGCTTGA 1041 0.5341 MSAQPCATDILTRATSCRDGSAAAHLKFISIFVIFFTSMFGMSSPVLLARLFQGKSLYDRAVALIKCFAAGVILSTSLVHVLPDAYASLADCRVATRHPWRDFPFSGLVTLIGALLALAVDLVASSHVEHSQYAPVKTNEKESSSGESRIELGGGGAGCHGGDNGVAVAAGGSAAAVEEEVLLRLKQKMVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSFGTMVYMCFMFSVTTPMGIVLGMAIFSLTGYDDSNPNALIIEGLLGSVSSGVLIYMALVDLIAVDFFHNKLMNSNPKLKKASFLALTLGSAAMSILALWA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121276g00006 346 PANTHER ZINC/IRON TRANSPORTER 24 340 - -
Stsc121276g00006 346 Pfam ZIP Zinc transporter 25 343 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc121276g00006 346 NCBIfam ZIP zinc/iron transport family 14 346 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121276g00006 Stsc-Chr121276 35608 37718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121276g00006 8 346 Inorganic Solute Cotransporters AT2G30080 61.932 8.78e-154 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121276g00006 K14709 - gmx:100797310 480.715