Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121276g00002 ATGGAATTCAAGGAGTTCATAATCAGAATCTATGAGGATCAATCTGATAGATCTCAGGTTGAAGATCTTGAGAGAAGGTGCAAGGTAGGACCATCAGAAACCATGCTTGACTCCATGGGTGACCCCATCAGTAGGATCCGTAACAGCCCCATGTACATGATGCTGGTGGCAGAGATGGAGAATGAATTGGTTGGTTTCATTCAAGGCTCTATAAAAGTGGTAACACTGAAGTGTCATCCACCAAAGGGTGTTGCAAAGGTTGGCTATGTCCTAGGCCTAAGGGTAGCCCCACAAACTAGGAGAAAAGGCATTGGTTCAAGCCTAATCCAAAGGCTAGAAGAATGGTTCCATTCCAATGATGTGGACTATGCATACATGGCCACAGAGAAAGAAAACCATGCCTCAATAAGCCTCTTCATCAACAAATTTGGGTACACCAAGTTTAGGACCCCAGCCATACTTGTGAACCCTGTCAACAATCACCACTCATTTAGAATCTCTTCCAACATTGACATTGCCAAAATCAAGATTGACAAAGCTGAGTTTCTTTATAGAAGATTCATGGGCACCACTGAATTTTTCCCTAGTGACATTGAAAATGTGCTTAGGAATAAGCTAAGTTTGGGAACATGGGTAGCCTCTTTCAAAGGGGAAAATGTCAGTTTTGGGATTAATGGGCCTGTTAATGGGCCTATTAATGGACAAGTACCCCAAAATTGGGCCATGCTTAGTGTGTGGAAAAGTGGGGATATTTTTAAGCTTAGCATTGGAAGAGCTCCAAACTCTTGCTTGTTTTTTACAAAGAGTTGGAGCTTAGTGGACAAAATATTTCCATGTTTTGGGCTATCAACTATACCTGATTTTTTCAACCCATTTGGGTTTTATTTCATTTATGGGGTTTACCATGAAGGCCAATTTTCAGGGAAACTTGTTAGGGCCTTGTGCCAATTTGTTCACAACATGGTCTCAAAGTCCAGGGATGAGAATTGCAACAAGATTATTGTGGCTGAAGTTGGAGGAAAAGATGAAGAGCTCAACCATCATATCCCACATTGGAAATTGTTCTCTTGCCCTGACTTGTGGTGCATTAAGGCCTTGAAAGATGAAGGGAAGAACACATTCCATGAACTAGTAACTAACACCCAACCCAGATCCATCTTTGTAGACCCAAGAGAGGTTTAA 1182 0.4179 MEFKEFIIRIYEDQSDRSQVEDLERRCKVGPSETMLDSMGDPISRIRNSPMYMMLVAEMENELVGFIQGSIKVVTLKCHPPKGVAKVGYVLGLRVAPQTRRKGIGSSLIQRLEEWFHSNDVDYAYMATEKENHASISLFINKFGYTKFRTPAILVNPVNNHHSFRISSNIDIAKIKIDKAEFLYRRFMGTTEFFPSDIENVLRNKLSLGTWVASFKGENVSFGINGPVNGPINGQVPQNWAMLSVWKSGDIFKLSIGRAPNSCLFFTKSWSLVDKIFPCFGLSTIPDFFNPFGFYFIYGVYHEGQFSGKLVRALCQFVHNMVSKSRDENCNKIIVAEVGGKDEELNHHIPHWKLFSCPDLWCIKALKDEGKNTFHELVTNTQPRSIFVDPREV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121276g00002 393 Pfam Acetyltransferase (GNAT) family 44 145 IPR000182 GO:0016747
Stsc121276g00002 393 CDD NAT_SF 54 125 - -
Stsc121276g00002 393 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 159 IPR000182 GO:0016747
Stsc121276g00002 393 Gene3D - 8 152 - -
Stsc121276g00002 393 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 393 - -
Stsc121276g00002 393 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 148 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121276g00002 Stsc-Chr121276 6493 8493 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc121276g00002 Acetyltransf_1 6.9e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121276g00002 - - gmx:100799507 575.474