Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121276g00001 ATGGAGAATGAATTGGTTGGTTTCATTCAAGGCTCTATAAAAGTGGTAACACTGAAGTGTCATCCACCAAAGGGTGTTGCAAAGGTTGGCTATGTCCTAGGCCTAAGGGTAGCCCCACAAACTAGGAGAAAAGGCATTGGTTCAAGCCTAATCCAAAGGCTAGAAGAATGGTTCCATTCCAATGATGTGGACTATGCATACATGGCCACAGAGAAAGAAAACCATGCCTCAATAAGCCTCTTCATCAACAAATTTGGGTACACCAAGTTTAGGACCCCAGCCATACTTGTGAACCCTGTCAACAATCACCACTCATTTAGAATCTCTTCCAACATTGACATTGCCAAAATCAAGATTGACAAAGCTGAGTTTCTTTATAGAAGATTCATGGGCACCACTGAATTTTTCCCTAGTGACATTGAAAATGTGCTTAGGAATAAGCTAAGTTTGGGAACATGGGTAGCCTCTTTCAAAGGGGAAAATGTCAGTTTTGGGATTAATGGGCCTGTTAATGGGCCTATTAATGGACAAGTACCCCAAAATTGGGCCATGCTTAGTGTGTGGAAAAGTGGGGATATTTTTAAGCTTAGCATTGGAAGAGCTCCAAACTCTTGCTTGTTTTTTACAAAGAGTTGGAGCTTAGTGGACAAAATATTTCCATGTTTTGGGCTATCAACTATACCTGATTTTTTCAACCCATTTGGGTTTTATTTCATTTATGGGGTTTACCATGAAGGCCAATTTTCAGGGAAACTTGTTAGGGCCTTGTGCCAATTTGTTCACAACATGGTCTCAAAGTCCAGGGATGAGAATTGCAACAAGATTATTGTGGCTGAAGTTGGAGGAAAAGATGAAGAGCTCAACCATCATATCCCACATTGGAAATTGTTCTCTTGCCCTGACTTGTGGTGCATTAAGGCCTTGAAAGATGAAGGGAAGAACACATTCCATGAACTAGTAACTAACACCCAACCCAGATCCATCTTTGTAGACCCAAGAGAGGTTTAA 1008 0.4107 MENELVGFIQGSIKVVTLKCHPPKGVAKVGYVLGLRVAPQTRRKGIGSSLIQRLEEWFHSNDVDYAYMATEKENHASISLFINKFGYTKFRTPAILVNPVNNHHSFRISSNIDIAKIKIDKAEFLYRRFMGTTEFFPSDIENVLRNKLSLGTWVASFKGENVSFGINGPVNGPINGQVPQNWAMLSVWKSGDIFKLSIGRAPNSCLFFTKSWSLVDKIFPCFGLSTIPDFFNPFGFYFIYGVYHEGQFSGKLVRALCQFVHNMVSKSRDENCNKIIVAEVGGKDEELNHHIPHWKLFSCPDLWCIKALKDEGKNTFHELVTNTQPRSIFVDPREV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121276g00001 335 CDD NAT_SF 2 67 - -
Stsc121276g00001 335 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 101 IPR000182 GO:0016747
Stsc121276g00001 335 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 93 IPR016181 -
Stsc121276g00001 335 Pfam Acetyltransferase (GNAT) family 2 87 IPR000182 GO:0016747
Stsc121276g00001 335 Gene3D - 1 94 - -
Stsc121276g00001 335 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121276g00001 Stsc-Chr121276 6493 8493 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Stsc121276g00001 Acetyltransf_1 1.9e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121276g00001 - - gmx:100799507 488.419