Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121272g00002 ATGGCGCGAATTTCTTCTTCTTCATGTTGTTGGGTGTTGATGATGATGGTTGTTCTTTTAGGGAGTTGTTCAGCACAGCTCTCTAATGAGAACTTCTATGCAAAGAAGTGTCCGAATGTGTTTAAAGCTATAAGATCTGTTGTTAAATCTGCTGTTGCTAAAGAACCTCGCATGGCTGCTTCTCTTCTTCGTCTTCACTTTCATGACTGCTTTGTCAATGGTTGTGATGGATCAGTGCTACTTGATGACACATCCTCCTTCAAAGGAGAGAAGACTGCACTTCCAAACAATAATTCATTGAGAGGCTTTGAGGTTATTGACGCCATTAAGGCTAAGGTTGAGTCAGTGTGCCCTGGTGTCGTCTCTTGTGCTGATATTCTTGCCATTACAGCTCGTGATTCTGTTCTACTTCTTGGAGGGCCTAATTGGAATGTAAAACTAGGAAGAAGGGATTCAAAGACAGCAAGCTTGGCAGCTGCAAACAGTGGTGTGATTCCAGCACCAACTGCTACCTTGAGCCAACTTATCTCAAAGTTTCAAGCTGTAGGCCTCTCTGCTAGGGACATGACTGCCTTATCTGGAGCACACACAATTGGGAAGGCAAGGTGCACTATCTATAGAAACCGCATATACAATGACACAAACATTGACAGAACATTTGCCAATGCAAGGAAGAAGAACTGTCCAAGGATTACAGGCACACCAAAGGACAACAATGTTGCACCCTTGGACTTCAAAACCCCCAACCATTTTGACAACAGCTACTACAGCAACCTCTTGAGCAAAAAGGGCCTCCTTCATTCTGATCAAGAACTCTTCAATGGTGGATCCACTGATTCATTGGTTAGAACTTACACCAACAACCAGAAGGCATTCTTTGCCGACTTCGCCACGGCAATGATTAAGATGGGGAACATCAAGCCCTTAACTGGCTCACAAGGCATCATTAGAAGGAACTGTAGGAGAGCAAATTAG 975 0.439 MARISSSSCCWVLMMMVVLLGSCSAQLSNENFYAKKCPNVFKAIRSVVKSAVAKEPRMAASLLRLHFHDCFVNGCDGSVLLDDTSSFKGEKTALPNNNSLRGFEVIDAIKAKVESVCPGVVSCADILAITARDSVLLLGGPNWNVKLGRRDSKTASLAAANSGVIPAPTATLSQLISKFQAVGLSARDMTALSGAHTIGKARCTIYRNRIYNDTNIDRTFANARKKNCPRITGTPKDNNVAPLDFKTPNHFDNSYYSNLLSKKGLLHSDQELFNGGSTDSLVRTYTNNQKAFFADFATAMIKMGNIKPLTGSQGIIRRNCRRAN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121272g00002 324 Gene3D - 31 321 - -
Stsc121272g00002 324 PANTHER PEROXIDASE 72-RELATED 22 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Stsc121272g00002 324 FunFam Peroxidase 166 303 - -
Stsc121272g00002 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Stsc121272g00002 324 Gene3D Peroxidase, domain 2 166 303 - -
Stsc121272g00002 324 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Stsc121272g00002 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 FunFam Peroxidase 31 183 - -
Stsc121272g00002 324 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Stsc121272g00002 324 SUPERFAMILY Heme-dependent peroxidases 30 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc121272g00002 324 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121272g00002 Stsc-Chr121272 26178 30981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121272g00002 11 324 Peroxidase AT5G58400 63.694 1.53e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121272g00002 K00430 - tcc:18591067 456.447