Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121268g00007 ATGGCATGCAATAGCAGTGATAATACTGGGAAGACAATCAGATGCAAAGCTGCAATATGCAGAAAAGCAGGTGAACCTCTTGTTATAGAGGAAATTGAGGTTGACCCACCAAAAGCTTGGGAGGTTCGGATCAAGATTCTACTCACTTCTCTCTGTCACTCTGATGTAACCTTCTGGAAAATGGACACAGCTCTTGTAGCAAAATTTCCAAGAATTTTTGGACACGAAGCTGTAGGAGTTGTGGAGAGCATAGGAGAGCACGTGGAAGAAGTGAAACAAGGGGACACAGTAGTCCCTGTGTTCCTTGCAAACTGCGGAGAATGCAGGGATTGTAAGAGTCCCAAGAGCAACCAATGCTCGAAATTCGGGAAAAAGCTTTACAATGGAATGCCAAGAGATGGAACAAGCAGATTTAGGGATATGAATGGCCAAACCGTGTATCATTTCTTCTGTGTTTCGAGCTTCTCAGAGTACTCTGTCGTGGACGTGGCACATTTGGTCAACATTAATCATTATCCCCTTCCTCCGGAGAAGGCTTGCTTGCTCAGTTGTGGTATTTCAACAGGGTTGGGAGCGGCGTGGAAAGAGGCTGACGTAGAAGAAGGGTCAACAGTGGCGATTTTTGGGCTTGGAGCTGTAGGCCTTGCTGTTGCTGTAGGAGCAAAGCAACGAGGAGCGACAAAGATCATAGGCGTCGATATTAATGATGAAAAATTTGAAATAGGAAAAAGATTTGGAATTACTGATTTTGTGAATCCCTCCACTTGTGGAGACAAATCAGTGAGTGAGGTGATTAAGGAAATGACAAATGGTGGTGCTGATTACTGCTTCGAGTGCATAGGCTTGTCTTCACTAATGGCGGAGGCTTTTAACAGTAGCCGGAATGTATATATGTTTGCTCTGATCTGA 909 0.4455 MACNSSDNTGKTIRCKAAICRKAGEPLVIEEIEVDPPKAWEVRIKILLTSLCHSDVTFWKMDTALVAKFPRIFGHEAVGVVESIGEHVEEVKQGDTVVPVFLANCGECRDCKSPKSNQCSKFGKKLYNGMPRDGTSRFRDMNGQTVYHFFCVSSFSEYSVVDVAHLVNINHYPLPPEKACLLSCGISTGLGAAWKEADVEEGSTVAIFGLGAVGLAVAVGAKQRGATKIIGVDINDEKFEIGKRFGITDFVNPSTCGDKSVSEVIKEMTNGGADYCFECIGLSSLMAEAFNSSRNVYMFALI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121268g00007 302 Gene3D - 18 188 - -
Stsc121268g00007 302 SUPERFAMILY GroES-like 9 199 IPR011032 -
Stsc121268g00007 302 Gene3D - 189 294 - -
Stsc121268g00007 302 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Stsc121268g00007 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 295 IPR036291 -
Stsc121268g00007 302 FunFam alcohol dehydrogenase 1-like isoform X1 23 188 - -
Stsc121268g00007 302 Pfam Alcohol dehydrogenase GroES-like domain 41 168 IPR013154 -
Stsc121268g00007 302 FunFam S-(hydroxymethyl)glutathione dehydrogenase 189 302 - -
Stsc121268g00007 302 Pfam Zinc-binding dehydrogenase 212 292 IPR013149 -
Stsc121268g00007 302 PANTHER ALCOHOL DEHYDROGENASE 10 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121268g00007 Stsc-Chr121268 33176 36950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121268g00007 41 272 Monolignol Biosynthesis Gene Families AT4G37970 27.559 8.07e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121268g00007 K00121 - zju:107420743 442.965