Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121262g00011 ATGGCTGATAATAGGCAACCAAACTTGAGCGGAGCCTACTACGGACCAGCCATTCCACCGGCTGAGCCGCCACGCCGCTACCGCCCCGACCGAAGCAGAAGCTGCTTCTGCTGCCTATTCAGCGTCTTCTGGAAGCTTCTCCTTACGCTCATCGTCCTGGTTGTGATAGCAGGAGTGATATTCTACCTAGTGGTTCAACCTCGCATGTTCAAATTCTACGTCAACAATGCCGAAATCACGCAATTCGACTACAACACCAACACCACCCAACTCCGCTACAACATGGTGCTCAACTTCACCGCCCACAACCCAAACAAGAAGCTGAGCATCTACTACGACAAGGTTCTAGCCAAAGCCTCCTTCATGGACACGCAATTCGCGTCCGCTGACGTCATCACTTTCATGAACTCGTTTAGGCAATACAAGAAGGAGAGCAACCCTATGAGCGGTGTTTTCTCCGGACAGCAGAACATTTTTCTTGATTATTCCAAGTACTCACAGATCAGTGATGACAAGAATAACAGATCTTTTGATATATTCGTGAAGCTCTACTTCAGGATGAGGTTTAGGCTCGGTGATTTGATTACTCGCACTTACAAGCCCAAAGTTAAGTGTGATCTCAAGGTTCCGTTCATCAATGGCACCAATGCTTTCACCTTCTTTAAGCTCACCAAGTGCGATATTGATTTCTGA 693 0.4762 MADNRQPNLSGAYYGPAIPPAEPPRRYRPDRSRSCFCCLFSVFWKLLLTLIVLVVIAGVIFYLVVQPRMFKFYVNNAEITQFDYNTNTTQLRYNMVLNFTAHNPNKKLSIYYDKVLAKASFMDTQFASADVITFMNSFRQYKKESNPMSGVFSGQQNIFLDYSKYSQISDDKNNRSFDIFVKLYFRMRFRLGDLITRTYKPKVKCDLKVPFINGTNAFTFFKLTKCDIDF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121262g00011 230 PANTHER OS05G0367900 PROTEIN 34 210 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121262g00011 Stsc-Chr121262 42279 42971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121262g00011 64 219 SNARE and Associated Proteins AT1G32270 29.114 5.06e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121262g00011 - - gmx:100807701 295.434