Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121262g00009 ATGCCCGGCCCCGCCGTTCTAGCAGCCGAGCAGCCACCGCAGGCCGCCGATGCGCCGTCTGACCTTGCATTCGACGATTTCTCCTCGCAATTCGATGGCTTCCCCATCCCTTCCATGGACGCGCTTTTCGCCGAAAACGCCGGCGGCACGCTGAATACTGATGCCTTCGCCTCCGATCTCCAATTCCCGATGGATTTTGGTGATGGTGGTGACTATGAGATCACCTTCGACGACCTCGATAACCTTTACATCCCCTCCGATGCCGACGATTTCCTCCTCCCCGACGCATGCAACTCTAATGGCGACCTGAATTTGCCGACGAACGGTGATCTGGGCGATTGTTCCGCTAAGAATTCCGATTGCGACGCCGCTAATTCAGACTCGCCTGAATCAGGATCCTGTGCTGTTTCCGGCAATCGGAGCTCAAGTGTTTCTAGGTTTTTGAATTCTCAGTCCTCCTCAGAGTCAGGCAGCTGCAAACGCGAGCTTTCACCTAATCCTCGTGACTCTGCTGCTGTGAAAGACTCGAGGTCTCCGTCGCATGATTCTGATTCGTGTGGCGAAAGGGAAGAGTCGTCGAATGGTGCCATTTCATCGCGGAGTTCGGGGAACGGTAGCGGGTCCGGTGTATACGAAACCATGAACTCGCCCTCACCTGATTGCGGCCGTTACGAGAGGGAAATTTCATCGTCACATGCACATACAATTTTGGATCAGAACGTGAAATTGGAGGATAATGGAAAAGGTTGTGATCTGAAGAGAAAGCAAGAGCACAGTGAAGGGAGTACTGAGACTAGAACCACCAAATTTAGAAAATCATCAGCTCCACTAGAGAGCAAGACACAACAGAATGTGGTGGTTGATGATGACGACGAAAAGAGGAAGGCCAGGTTGATGAGGAACAGGGAAAGTGCACAGCTTTCGAGACAGAGGAAGAAGCACTATGTGGAGGAGCTTGAGGAGAAGGTGAGATCAATGCATTCAACAATTGCTGATTTGAGTAGCAAGATTTCGTTTGTGATGGCTGAGAACGCCACTTTGAAGCAGCAATTGGGTGTTGGTGGGATGTGCCCTCCTCCACCTGTTCCTGGCATGTATCCTCATGCTCCTCCCATGGCCCACATGCCTTATGCATGGATGCCATGTGCTCCCTACGTTGTTAAGCCTCAAGGATCTCAGGTTCCCTTGGTCCCCATTCCAAAGTTGAAGCCTCAGCAACCTGCTTCTTCATCAAAGAGTAGGAAGTCTGAAGGTAAGAAGAGTGAGGTGAAAACTAAGAAGGTTGCTAGCATTAGTTTGTTGGGTTTGTTTTTCTTTATACTGCTTTTTGGTGGGCTTGTTCCTAGCGTGGACGTCAAGTTTGGTGGCTTAGTGGGGTATGTTCCCGGTAGGTCTAGTTATGTTACTGATAGGTTCTATGGTGATCATCAAGGTGGAGGGAAGGTGTGGCCTGTGAATGGTCCTAGGAATGGATCTGAAAGAGACGAGGATATAGGGTATTCCAATGGGAGGTTTAGTATTTCCGACCAGAGGGATTATGAGAGGGGTCGGAAACTAGGAGAGGAAACTCATGAACGGCAAGACCCACGATGTGATGAATTCGGCCATCGTGGCAATGCCAGTGAGCCCCTGCTTGCTTCGCTGTATGTCCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATACTGGCTGGTGAGAAAGCTATGGCTTCTCAGACTCATGAGGCAAAGAAGGACAATAAAGAAACTGGTTTGGTCATTCCTAAGGATTGGGATTCTGCTTTGGCAATTCCCCAAGTTGGAAGGAATAGAGGTCAGCATCCTCATGTGTATACAGTTCCACCTGAGCAGAGGAAGGCTCTTGGTTCTGGTTCAACCAAAACTTTAAAGGACCACATGAAATCCTCTGCAAGTGATGGTAAAATGCAGCAGTGGTTCCGTGAAGGCCTTGCAGGTGATCATCTGTTTAATTTGTTTCTGTTACTGATTTCCATTCTAAAATTGCCGAATATAAATGATACATTGTCTTCTGCTGACTTGTGA 2061 0.4881 MPGPAVLAAEQPPQAADAPSDLAFDDFSSQFDGFPIPSMDALFAENAGGTLNTDAFASDLQFPMDFGDGGDYEITFDDLDNLYIPSDADDFLLPDACNSNGDLNLPTNGDLGDCSAKNSDCDAANSDSPESGSCAVSGNRSSSVSRFLNSQSSSESGSCKRELSPNPRDSAAVKDSRSPSHDSDSCGEREESSNGAISSRSSGNGSGSGVYETMNSPSPDCGRYEREISSSHAHTILDQNVKLEDNGKGCDLKRKQEHSEGSTETRTTKFRKSSAPLESKTQQNVVVDDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSSKISFVMAENATLKQQLGVGGMCPPPPVPGMYPHAPPMAHMPYAWMPCAPYVVKPQGSQVPLVPIPKLKPQQPASSSKSRKSEGKKSEVKTKKVASISLLGLFFFILLFGGLVPSVDVKFGGLVGYVPGRSSYVTDRFYGDHQGGGKVWPVNGPRNGSERDEDIGYSNGRFSISDQRDYERGRKLGEETHERQDPRCDEFGHRGNASEPLLASLYVPRNDKLVKIDGNLIIHSILAGEKAMASQTHEAKKDNKETGLVIPKDWDSALAIPQVGRNRGQHPHVYTVPPEQRKALGSGSTKTLKDHMKSSASDGKMQQWFREGLAGDHLFNLFLLLISILKLPNINDTLSSADL 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121262g00009 686 Gene3D - 291 353 - -
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 119 163 - -
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 1 22 - -
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 622 642 - -
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 397 422 - -
Stsc121262g00009 686 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 291 351 IPR004827 GO:0003700|GO:0006355
Stsc121262g00009 686 FunFam bZIP transcription factor 49 292 354 - -
Stsc121262g00009 686 SMART brlzneu 289 353 IPR004827 GO:0003700|GO:0006355
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 225 273 - -
Stsc121262g00009 686 PANTHER BZIP TRANSCRIPTION FACTOR 60-LIKE 20 657 - -
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 190 215 - -
Stsc121262g00009 686 Coils Coil 316 336 - -
Stsc121262g00009 686 CDD bZIP_HY5-like 294 345 - -
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 174 189 - -
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 119 292 - -
Stsc121262g00009 686 MobiDBLite consensus disorder prediction 479 503 - -
Stsc121262g00009 686 SUPERFAMILY Leucine zipper domain 293 351 IPR046347 GO:0003700|GO:0006355
Stsc121262g00009 686 Pfam bZIP transcription factor 293 351 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121262g00009 Stsc-Chr121262 35621 38031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121262g00009 29 658 bZIP Transcription Factor Family AT2G40950 44.828 6.71e-115 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc121262g00009 bZIP_1 6.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121262g00009 K25783 - gmx:100127362 687.182