Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121262g00006 | ATGAGGGAAGAAGATTCAAACTGGTTCGCCAGATGGGAAGATGAACTGCCTCCGCCGGAGGAACTCATGCCTTTATCGCAAACCCTAATCACACCCGATCTTGCCATCGCCTTCGACATCCCCAGCCCTCACACCCCAACCGCGCCACCCACCGCCACCCCAACCACCCCCAACCACCATCTCCACCACCACCAACAACCACAACCACAACCACCTTCAAACCCTTCCCCCTCGCATCAGCAACAACCCTCCTCCGGTGGCGACTTCGCCGATTCCGGCGATCTCGGCTCCGGCGCCGCCGGCGAGGAGCCTGCCAGAACCCTCAAGAGGCCTCGCCTTGTTTGGACCCCACAGCTCCACAAGCGCTTCGTCGACGCCGTTGCACACCTCGGAATCAAGAACGCCGTTCCGAAGACCATAATGCAGCTCATGAGCGTTGACGGATTAACTCGCGAGAACGTCGCCAGCCATCTCCAGAAGTACCGCCTCTACCTCAAGCGCATGCAGGGACTCTCCGCCGCCGGACCCGGCGGAGGAGGAGCCGGTGGCGGTGGATCCGATGCTGCCACCGATCATCTCTTCGCCAGCTCCCCCGTGCCGGCGCATTTCCTCCATCCGGCTGCCGCGGCAGCGGGCGGGAGGCCTAATTCGGAGCATTTCCTGCCGTTTGTGCCGGTTCCGGCGATGCACCACCAGCAACACCACCACCAGATGGCTGCCGCAGCTGCTGGTGCCGCTGCGATGCAGCACGCCCAGCTGCAGCAGCAGTTCCATAGGCAGGCGGCCGGGCATTTTGGGTCGCCGCCGAATGGGCACTTTGAGCATGCTTTCTTGTCAAGGCAGCAGCAGCAGCAGCAGCCGCAGAATCAACAGCAGCCATTCAATAGAATGGGTGGAGGTGTGTCTGGATATGTAGAGGACATGGAATCTGCTAATGCATCTGGTGGAAGGAAGGTTCTTACTCTTTTTCCAACAGGAGATGATTGA | 987 | 0.6049 | MREEDSNWFARWEDELPPPEELMPLSQTLITPDLAIAFDIPSPHTPTAPPTATPTTPNHHLHHHQQPQPQPPSNPSPSHQQQPSSGGDFADSGDLGSGAAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAAGPGGGGAGGGGSDAATDHLFASSPVPAHFLHPAAAAAGGRPNSEHFLPFVPVPAMHHQQHHHQMAAAAAGAAAMQHAQLQQQFHRQAAGHFGSPPNGHFEHAFLSRQQQQQQPQNQQQPFNRMGGGVSGYVEDMESANASGGRKVLTLFPTGDD | 328 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121262g00006 | 328 | SUPERFAMILY | Homeodomain-like | 107 | 167 | IPR009057 | - | |
Stsc121262g00006 | 328 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 115 | 166 | IPR017930 | - | |
Stsc121262g00006 | 328 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 111 | 163 | IPR006447 | GO:0003677 | |
Stsc121262g00006 | 328 | MobiDBLite | consensus disorder prediction | 278 | 297 | - | - | |
Stsc121262g00006 | 328 | MobiDBLite | consensus disorder prediction | 1 | 109 | - | - | |
Stsc121262g00006 | 328 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Stsc121262g00006 | 328 | FunFam | Two-component response regulator | 106 | 169 | - | - | |
Stsc121262g00006 | 328 | MobiDBLite | consensus disorder prediction | 278 | 328 | - | - | |
Stsc121262g00006 | 328 | Pfam | Myb-like DNA-binding domain | 114 | 162 | IPR001005 | - | |
Stsc121262g00006 | 328 | Gene3D | - | 107 | 169 | - | - | |
Stsc121262g00006 | 328 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 3 | 300 | IPR044841 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121262g00006 | Stsc-Chr121262 | 26046 | 27032 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121262g00006 | 1 | 328 | G2-like Transcription Factor Family | AT3G10760 | 56.620 | 1.35e-98 | 293 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Stsc121262g00006 | Myb_DNA-binding | 2.5e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121262g00006 | - | - | aip:107623693 | 425.246 |