Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121262g00005 | ATGGAAGCTGTAGAGTGGCCCCAGAAGCACCGTGATGCATTCAACCGTATTGGGACTCGCCCTCCTACAGGTGTATTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGAGCAGTTGCTTCTGAAGCTGGGCTGAACTTCTTAGCTGTCAAGGGTCCTGAACTCTTCAGTAAATGGGTTGGTGAATCAGAGAAGGCTGTCAGATCATTGTTTGCAAAAGCAAGGACCAATGCTCCATCCATTGTATTTTTTGATGAAATTGATAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGGAGAGTAAATGTCACTGTCATAGCTGCTACAAATAGGCCAGATAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGATCGCCTGCTTTATGTTGGACCTCCAAATGAGAGAGACAGAGAAGATATATTTCGCATTCATTTGCATAAAATTCCATGCGAAGCTGATGTTAGCATTAAAGAACTTGCTAGCCTCACAGATGGTTATACTGGAGCTGATATATCACTGATATGTCGAGAGGCAGCCGTTGCAGCAATTGAGGAGAACCTTGGTGCTTCAGTTATAACAATGAAGCATTTGAAGAAGGCAATCAATCAGGGCCAGCCATCTGAAGTACAGTCCTACCAGAAGCTGTCAGCAAAGTTTCAAAGGGCTGTTCGCAGCTGTGATATAAATCTTGATGACATGCCGCACAAAAGTGGATATACTTCCTTCAACATTCGGAAGGTCCTAAAATATTGCGCATTGTTCCTTCCTATTCCAGCAGTCATTCTTTATTTGCGGACGACACCAAGTGGTTAG | 849 | 0.4441 | MEAVEWPQKHRDAFNRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARTNAPSIVFFDEIDSLAVTRGKESDGVSVSDRRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNERDREDIFRIHLHKIPCEADVSIKELASLTDGYTGADISLICREAAVAAIEENLGASVITMKHLKKAINQGQPSEVQSYQKLSAKFQRAVRSCDINLDDMPHKSGYTSFNIRKVLKYCALFLPIPAVILYLRTTPSG | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121262g00005 | 282 | Pfam | ATPase family associated with various cellular activities (AAA) | 25 | 142 | IPR003959 | GO:0005524|GO:0016887 | |
Stsc121262g00005 | 282 | FunFam | calmodulin-interacting protein 111 isoform X1 | 1 | 143 | - | - | |
Stsc121262g00005 | 282 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 217 | IPR027417 | - | |
Stsc121262g00005 | 282 | Gene3D | - | 2 | 143 | IPR027417 | - | |
Stsc121262g00005 | 282 | CDD | RecA-like_CDC48_r2-like | 1 | 141 | - | - | |
Stsc121262g00005 | 282 | ProSitePatterns | AAA-protein family signature. | 113 | 131 | IPR003960 | GO:0005524|GO:0016887 | |
Stsc121262g00005 | 282 | PANTHER | AAA-FAMILY ATPASE | 1 | 233 | - | - | |
Stsc121262g00005 | 282 | Gene3D | - | 144 | 223 | - | - | |
Stsc121262g00005 | 282 | SMART | AAA_5 | 21 | 145 | IPR003593 | GO:0016887 | |
Stsc121262g00005 | 282 | Pfam | AAA+ lid domain | 165 | 211 | IPR041569 | - | |
Stsc121262g00005 | 282 | FunFam | spermatogenesis-associated protein 5-like protein 1 | 144 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121262g00005 | Stsc-Chr121262 | 18575 | 20557 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121262g00005 | 1 | 267 | Calmodulin-binding Proteins | AT3G56690 | 70.463 | 1.15e-131 | 396 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121262g00005 | - | - | gmx:100788600 | 435.261 |