Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121260g00004 ATGGAAGTTGCTACAAGGAAAGCAGCTTCCTCGTACACAACACTACTCGTGTTATTCTTGTTTCTCTTTTTGAGCTTTGTTCCTTCTCATGGACAAAATGCAGCCATTGCTGATGGCGGTGAAGCCAAGGCGGCCGCAATTGCGGACGGGGAGGCCAAATTCGACGACAAACCCGCGGAAGCCAAGGATGCAGCTGCGGTGGCGGCTGACAAGCCGGCTGCAGCTGCGGATGGGGAAGCCAAAATCGACAATGCAGCCGCGGCTAACGGCGCGGCAGCCAAGGTTGACGATCCCGCCAAGGCTTTAGTCGCGGTTGAGGATGGCAAGCCGGCTGTGGCTGGAAAAGCAGATGTTGAGGCTGCAGATGCTGCAGACGCGGACGGCAAAGCGGTCAAGCCTGTCAAAGGAGCAGATGCAGCGGACACCGCCCTTGCGGCAGTTGATGCTCCTCCGCCTCCTCCGGCAGAATTGGAGGTTTGCAATGGGGTGTTCCTAACGTACACGCTGTTAACACGCGAAAAGGAATATCCATTCGTGAAGAACAAGTCAAATCAAGCATACGCCTTCACGTCCCAAGCCACGATTACAAACGTGGGTGACGAGGAGGTGAAGGGTTGGAAGATGTACATCGGGTTCCAACACCGAGAAATATTGGTTTCCATGGACGGCGGCATCCCCATCGATGCGGAAGACTTCCCGTCCGGGGTGGGGAACGGCACCACGATCGCCGGAAACCCAATGGTGGATCTAAAGACTGCGATCTTGACGGCTAATGATTTTACACAAATGTCGGTGCAAGTTGGGATGAAAGGGTCACAGTTCGGTCTTGGCGATGGCGCCACCCCCATGCCTAAGACCATTAAGCTCATCAATAGTGGCTTCAAATGTCCTGCTGCTACTCGCAGAGGGTCAACAATGATAGTATGTTGCAAGAAAGATCCAAAAGCTAAGGCATTGGCGCTTAAGAAGACCAAGTACCCTCCACGTGGCAAAGGTGATTTAACCATTTCATACGACGTGCTACAGGCTTTCCAGACAAACTACTACGCTGAGGTCACCATCCAAAACCACCACCCGCTGGGCCGCCTCGACCACTGGAACCTCACCTGGGAATGGCAGAGGGGCGAGTTCATCTACGCCCTGAAAGGTGCCTTTGCCCGCGTCAAGGACCCTTCCGTATGCTTGTACGGCCCTGCAGGCCAGTACTACAGGGATTTTGATTTCACCAATGTCGCTAATTGCGAGAAGAAGCCCATCATCTCTGATCTCCCCGCTGAGAGAAAAGACGATGAAAAGATCGGGAAGCTACCATGGTGCTGCAGGAATGGCACCGTGCTGTCACCTCTCATGGACAGGAACCAAGCGAGGTCAATGTTCCAGCTCCAAGTTTTCAAGATTCCACCGGATAACAACAGAACGGCGCTCACACCACCAATGAGATGGAAGATCGACGGTGTCATCAACCCGCACTACAAGTGCGGGCCACCGATCAGGGTGGACCCCACAGAGTACCCCGATCCATCCGGTCTCAAGGCGATCCACACGGCCGTCGCAAGTTGGCACATCGTTTGCAACATAACGAAGCCAGCGCCTCAGAAATCAAGGTGCTGCGTTTCATTCTCTGCATTCTACAACGAATCCGCCATCCCCTGCAACACTTGCGCTTGCGGCGGTTGTGACGGTCACAGGCAATGCAACGCAAAGGTACCTCCCATGCTTGTTCCTCCGGACGCGCTTCTCGTCCCGTTTGTTAACAGAACCGCCAAGATCAAAGCCTGGGCGAAGATGAAGCATTTCAAGATCCCTAAACGGTTGCCCTGCGGCGATCACTGCCCCGTCAGCATCAACTGGCACGTGAACTCCGACTACAAAACCGGATGGACTGCAAGAATCACCCTCTTCAACTGGGAGCGCTACGCCTTCGATGATTGGTTCACTGCTATTCAGTTCCACAACAATTCTTTCAGAGATTTCGAGGAAGTTTACTCCTTCAACGGAACCAGAATTCCCGGGCTTAGAACCATCTTCATGCAAGGTTATGAGGGTTTGAACTATTTGGTGGGACTCACCAATGGAAGCCGGATCGGTGCCCCGCACGTGCCGGGGAAGCAGCAGTCCGTACTGTCCTTCAAGAAGAAGTATTCCAGGAAATTTAACATCAGAAGAGATGCATTCCCAACCAAGGTTTACTTCAATGGTGAAGAGTGTTCTCTCCCTCCAACTACTCCTTCTAACGGCGCCTCTCGCATCAAGTCTTCTCCGATCAGTTTCCTCGCGGTTGCCGTCATCGCATTGTTGTCGTTCTTGGCCATGACCGGGCGTTTTTACTGA 2331 0.5332 MEVATRKAASSYTTLLVLFLFLFLSFVPSHGQNAAIADGGEAKAAAIADGEAKFDDKPAEAKDAAAVAADKPAAAADGEAKIDNAAAANGAAAKVDDPAKALVAVEDGKPAVAGKADVEAADAADADGKAVKPVKGADAADTALAAVDAPPPPPAELEVCNGVFLTYTLLTREKEYPFVKNKSNQAYAFTSQATITNVGDEEVKGWKMYIGFQHREILVSMDGGIPIDAEDFPSGVGNGTTIAGNPMVDLKTAILTANDFTQMSVQVGMKGSQFGLGDGATPMPKTIKLINSGFKCPAATRRGSTMIVCCKKDPKAKALALKKTKYPPRGKGDLTISYDVLQAFQTNYYAEVTIQNHHPLGRLDHWNLTWEWQRGEFIYALKGAFARVKDPSVCLYGPAGQYYRDFDFTNVANCEKKPIISDLPAERKDDEKIGKLPWCCRNGTVLSPLMDRNQARSMFQLQVFKIPPDNNRTALTPPMRWKIDGVINPHYKCGPPIRVDPTEYPDPSGLKAIHTAVASWHIVCNITKPAPQKSRCCVSFSAFYNESAIPCNTCACGGCDGHRQCNAKVPPMLVPPDALLVPFVNRTAKIKAWAKMKHFKIPKRLPCGDHCPVSINWHVNSDYKTGWTARITLFNWERYAFDDWFTAIQFHNNSFRDFEEVYSFNGTRIPGLRTIFMQGYEGLNYLVGLTNGSRIGAPHVPGKQQSVLSFKKKYSRKFNIRRDAFPTKVYFNGEECSLPPTTPSNGASRIKSSPISFLAVAVIALLSFLAMTGRFY 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121260g00004 776 PANTHER COBRA-LIKE PROTEIN 7 89 770 - -
Stsc121260g00004 776 Pfam COBRA-like protein 348 527 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121260g00004 Stsc-Chr121260 26472 28959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121260g00004 153 766 COBRA Gene Family AT3G20580 58.682 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121260g00004 - - ahf:112772953 1272.69