Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121260g00002 ATGGCTAATACCAGCATTTTAAGGTCTAATGAAGTATATCATGTGTTGTTGGGACTGTTCTGTGTCTTGCTCTTGGTAAAGGAGGGTAATGCTTATGAGTTTGTAGTTGGGGGTCAAAAGGGTTGGAGTGTTCCAAGTGACCCCAATTCCAATTCTTACGATCAATGGGCTGAGAAGAGCAGGTTTCAAATAGGAGACTCCCTAGTGTTCAATTACCAACCTGGTCAAGACTCGGTGCTTCAAGTAACTAGCGAAGACTATGCAAGCTGCAAGACTGATGGATCTTCTGAAAAATTCTCTGATGGCCATACAGTCATCAAGCTGAACCAATCAGGGCCTCACTATTTCATAAGCGGAAACAAAGATAACTGTGCCAAGAATGAGAAGCTAGTGGTTATTGTCATGGCTGACAGGACCAACAGAAACACCAACCAAACAAGCACTGTTGTTTCTCCTTCTCCTTCTCCCTTACCCACACTCTCAACAGAGTCAATTGCTCCTGCACCACCAACAGCAGGGACTGTGGGTGCTCCACCACCAACAGGAACTGTCGGTGCTCCTCCGCCTCCAGGGACTGTCGGTGCGCCACCACCAACACCAGCAGGGACTGTAGGTGCTCCACCACCTACACCAACAGGGACTTTGGGTACTCCACCTCCTCCAATAGGAGTTTCATATCCACCACCAGGGACTTTAAACCCGACTTCTGCTCCTGTCAGCCAACCTCCTCCTAATGCCGCTTCTTCAGTCTTCCTCAGCTTTGTTGGCTCTGTTGGAGCATTCATGGCTTCAATTCTGGTTTTATCATTCTAA 813 0.4785 MANTSILRSNEVYHVLLGLFCVLLLVKEGNAYEFVVGGQKGWSVPSDPNSNSYDQWAEKSRFQIGDSLVFNYQPGQDSVLQVTSEDYASCKTDGSSEKFSDGHTVIKLNQSGPHYFISGNKDNCAKNEKLVVIVMADRTNRNTNQTSTVVSPSPSPLPTLSTESIAPAPPTAGTVGAPPPTGTVGAPPPPGTVGAPPPTPAGTVGAPPPTPTGTLGTPPPPIGVSYPPPGTLNPTSAPVSQPPPNAASSVFLSFVGSVGAFMASILVLSF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121260g00002 270 CDD OsENODL1_like 32 135 IPR041846 -
Stsc121260g00002 270 ProSiteProfiles Phytocyanin domain profile. 32 136 IPR003245 GO:0009055
Stsc121260g00002 270 MobiDBLite consensus disorder prediction 172 241 - -
Stsc121260g00002 270 MobiDBLite consensus disorder prediction 143 241 - -
Stsc121260g00002 270 FunFam Early nodulin-like protein 9 32 146 - -
Stsc121260g00002 270 PANTHER BLUE COPPER PROTEIN 32 153 IPR039391 GO:0009055
Stsc121260g00002 270 Pfam Plastocyanin-like domain 42 126 IPR003245 GO:0009055
Stsc121260g00002 270 MobiDBLite consensus disorder prediction 143 168 - -
Stsc121260g00002 270 SUPERFAMILY Cupredoxins 31 135 IPR008972 -
Stsc121260g00002 270 Gene3D - 32 148 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121260g00002 Stsc-Chr121260 9932 11423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121260g00002 17 187 Phytocyanin Superfamily AT3G20570 56.571 7.23e-56 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121260g00002 - - adu:107462411 345.125