Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121253g00009 ATGGCACCCTCCATTTACTACTTCCTCCTTGCACTTTCTTTTCTCATCACACTCACACTCTTGCTCCGATTCCAATCTAGAAGGTTCAAGAACCTCCCACCAGGACCACCAACCCTTCCCTTAATCGGCAACCTTCACTACCTCAAGCCACCACCCCACCGCACCTTCGCTGCCCTCGCCGCCTCCTATGGCGACATCATGTCGCTTTGGTTCGGCAACCGCCTCGTCGTGGTCGTGTCCTCGCCGTCCTTGGCGCAGGAATGTTTCACCAAGAACGACGTCGTATTGGCCAACCGACCCCGATTCCTTACCGGAAAGTACATATTTTATAACTACACTACGTTGGGTTCTGCCTCCTATGGTGATCACTGGCGCAACCTCCGCCGCATTACCACCATTGATGTCCTCTCCAACCACCGCCTCAACTCCTTCCTCGAAATCCGGAGGGACGAGACAAAGAGACTGATCGAGAAGTTAGGAAACGAGACAAGTAATGGCGAGTTCGTGAAGGTGTCACTAAGGTCAAGACTAACAGAAATGACATTCAACGGAATGATGAGGATGATCTCCGGTAAGAGGTACTACGGTGATGACGTGGACATGACCGACGTCGAGGAGGCCAAGCAATTCCGGGAAATCATAACGGAGATCCTCTCCTTGCTCGGAGCAAACAACAAGGGTGACTTCATGCCTCTGGCGAAGCTCTTTGATTTCGATGACTTGGAGAAGAGGCTCAAAAGAATCGCCAAGAGAGCTGACTCCTTCTTGCAAGGCCTCATCGAGGAGCACCGTGTCGCCGCCCTCAACAACGGTGGCGCCGACACCATGATTTTCCATCTCTTGAAGCTTCAAGAGACACAACCGGAGTATTACTCTGATCTCATGATTAAAGGCCTTATTCAGGCTATGCTTCTTGCTGGAACAGACACATCAGCAGTATCAATGGAATGGGTTATGGCTGAATTACTAAACCACCCTGAAGTAATGAAGAAGGTAAAACATGAATTAGACACACAAATAGGAAAGGAACGTTTATTAGAAGAACAAGATTTGTCAAAGCTACCATACCTTCAAAACGTTATTTCTGAATCACTTAGATTGCACCCACCAGCACCATTGCTATTGCCTCATTCTACCTCAGAAGATTGTACCATTGGAGGATACAACATTCCAAAAGACACCATAGTCTTAACAAATGCATGGCTAATTCATAGGGATCCTAAGCTTTGGGCTGATGCTGAGAGTTTTAAGCCTGAGAGGTTTGAGAATGAAGGGGAGGCGAATAAGTTAATTTCGTTTGGGCTTGGAAGAAGGGCATGTCCTGGATTGGGCCTGGCCCAACGAACAATGGGCCTTACTTTGGGCTTGTTGATGCAATGCTTTGAATGGAAAAGAGTGAGTGAGGAAAAGCTTGACATGGCTGAAGACAAAGGGATTGCAATGCCAATGAAAGTTCCATTGGAAGCTTTGTGCAAAGCACTACCAACCGTCGATGGTATTACGAAGTACTAA 1512 0.4782 MAPSIYYFLLALSFLITLTLLLRFQSRRFKNLPPGPPTLPLIGNLHYLKPPPHRTFAALAASYGDIMSLWFGNRLVVVVSSPSLAQECFTKNDVVLANRPRFLTGKYIFYNYTTLGSASYGDHWRNLRRITTIDVLSNHRLNSFLEIRRDETKRLIEKLGNETSNGEFVKVSLRSRLTEMTFNGMMRMISGKRYYGDDVDMTDVEEAKQFREIITEILSLLGANNKGDFMPLAKLFDFDDLEKRLKRIAKRADSFLQGLIEEHRVAALNNGGADTMIFHLLKLQETQPEYYSDLMIKGLIQAMLLAGTDTSAVSMEWVMAELLNHPEVMKKVKHELDTQIGKERLLEEQDLSKLPYLQNVISESLRLHPPAPLLLPHSTSEDCTIGGYNIPKDTIVLTNAWLIHRDPKLWADAESFKPERFENEGEANKLISFGLGRRACPGLGLAQRTMGLTLGLLMQCFEWKRVSEEKLDMAEDKGIAMPMKVPLEALCKALPTVDGITKY 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121253g00009 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Stsc121253g00009 503 Gene3D Cytochrome P450 20 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 SUPERFAMILY Cytochrome P450 33 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121253g00009 503 FunFam Cytochrome P450 family protein 24 497 - -
Stsc121253g00009 503 PANTHER CYTOCHROME P450 82C3-RELATED 11 492 - -
Stsc121253g00009 503 CDD CYP81 64 487 - -
Stsc121253g00009 503 Coils Coil 142 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121253g00009 Stsc-Chr121253 35766 41208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121253g00009 4 497 Cytochrome P450 AT4G37370 54.930 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121253g00009 K13260 - ccaj:109806032 688.723